RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 FAM3BP58499 235 aaPredicted RBP10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 GNG2P59768 71 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 RPL11P62913 178 aaKnown RBP10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 ZNF367Q7RTV3 350 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 ZNF114Q8NC26 417 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 OR51H1Q8NH63 302 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 C1QTNF4Q9BXJ3 329 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 SLC5A7Q9GZV3 580 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 SCRT2Q9NQ03 307 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 PRNDQ9UKY0 176 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 KNCNA6PVL3 124 aa10.16□□□□□ -0.78
PRPF40A-211ENST00000493468 CASQ2O14958 399 aaPredicted RBP10.16□□□□□ -0.78
PRPF40A-211ENST00000493468 RAB3BP20337 219 aa10.16□□□□□ -0.78
PRPF40A-211ENST00000493468 TNP2Q05952 138 aa10.16□□□□□ -0.78
PRPF40A-211ENST00000493468 KCTD21Q4G0X4 260 aa10.16□□□□□ -0.78
PRPF40A-211ENST00000493468 AADACL3Q5VUY0 350 aa10.16□□□□□ -0.78
PRPF40A-211ENST00000493468 ZNF818PQ6ZRF7 136 aa10.16□□□□□ -0.78
PRPF40A-211ENST00000493468 MISP3Q96FF7 219 aa10.16□□□□□ -0.78
PRPF40A-211ENST00000493468 SCN3BQ9NY72 215 aa10.16□□□□□ -0.78
PRPF40A-211ENST00000493468 FKBP11Q9NYL4 201 aa10.16□□□□□ -0.78
PRPF40A-211ENST00000493468 TEX48A0A1B0GUV7 120 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 A0A1W2PS18 150 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 TMEM189A5PLL7 270 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 SNAPC5O75971 98 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 MT-CO2P00403 227 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 ZNF688P0C7X2 276 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 SPART-AS1P0CW21 52 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 MYL9P24844 172 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 FGF9P31371 208 aaPredicted RBP10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 ACTL10Q5JWF8 245 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 LCE2DQ5TA82 110 aaPredicted RBP10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 ZNF600Q6ZNG1 722 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 BEST4Q8NFU0 473 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 STXBP6Q8NFX7 210 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 DCANP1Q8TF63 244 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 BORCS5Q969J3 196 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 NEU1Q99519 415 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 RNF167Q9H6Y7 350 aa10.15□□□□□ -0.78
PRPF40A-211ENST00000493468 IGHV3-66A0A0C4DH42 116 aa10.14□□□□□ -0.79
PRPF40A-211ENST00000493468 F2RP25116 425 aa10.14□□□□□ -0.79
PRPF40A-211ENST00000493468 NUTF2P61970 127 aaKnown RBP10.14□□□□□ -0.79
PRPF40A-211ENST00000493468 TSC22D3Q99576 134 aa10.14□□□□□ -0.79
PRPF40A-211ENST00000493468 MGLLQ99685 303 aa10.14□□□□□ -0.79
PRPF40A-211ENST00000493468 NSG2Q9Y328 171 aa10.14□□□□□ -0.79
PRPF40A-211ENST00000493468 PUS1Q9Y606 427 aaKnown RBP eCLIP10.14□□□□□ -0.79
PRPF40A-211ENST00000493468 NPBWR1P48145 328 aa10.13□□□□□ -0.79
PRPF40A-211ENST00000493468 ZNF705AQ6ZN79 300 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-211ENST00000493468 HOGA1Q86XE5 327 aa10.13□□□□□ -0.79
PRPF40A-211ENST00000493468 DUSP21Q9H596 190 aa10.13□□□□□ -0.79
PRPF40A-211ENST00000493468 SMIM9A6NGZ8 99 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 DBX1A6NMT0 343 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 KRASP01116 189 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 PTHLHP12272 177 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 NPPCP23582 126 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 CRYBB3P26998 211 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 GNRHRP30968 328 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 P2RY1P47900 373 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 FXYD4P59646 89 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 OXA1LQ15070 435 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 TPRA1Q86W33 373 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 RAB40CQ96S21 281 aa10.12□□□□□ -0.79
PRPF40A-211ENST00000493468 A0A1B0GU03 582 aa10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 ZNF705FA8MVS1 300 aaPredicted RBP10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 IGHV3-48P01763 117 aa10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 ZNF705DP0CH99 300 aaPredicted RBP10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 ZNF705BP0CI00 300 aaPredicted RBP10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 G6PCP35575 357 aa10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 TMEM17Q86X19 198 aa10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 C6orf223Q8N319 242 aa10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 FCAMRQ8WWV6 532 aa10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 PINX1Q96BK5 328 aaKnown RBP10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 MOB3AQ96BX8 217 aa10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 METTL26Q96S19 204 aa10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 DKK2Q9UBU2 259 aa10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 TPRKBQ9Y3C4 175 aa10.11□□□□□ -0.79
PRPF40A-211ENST00000493468 TRDV1A0A1B0GX56 115 aa10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 RGS10O43665 173 aa10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 PGLYRP1O75594 196 aaPredicted RBP10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 RLN1P04808 185 aa10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 LPAR6P43657 344 aa10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 EIF2B2P49770 351 aaKnown RBP10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 PRCDQ00LT1 54 aa10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 OGFRL1Q5TC84 451 aaPredicted RBP10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 NIPSNAP3BQ9BS92 247 aa10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 SEPSECSQ9HD40 501 aaKnown RBP10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 NDUFB11Q9NX14 153 aa10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 XCL2Q9UBD3 114 aa10.1□□□□□ -0.79
PRPF40A-211ENST00000493468 NBDYA0A0U1RRE5 68 aa10.09□□□□□ -0.79
PRPF40A-211ENST00000493468 HELTA6NFD8 242 aa10.09□□□□□ -0.79
PRPF40A-211ENST00000493468 NOTOA8MTQ0 251 aa10.09□□□□□ -0.79
PRPF40A-211ENST00000493468 TMEM50AO95807 157 aa10.09□□□□□ -0.79
PRPF40A-211ENST00000493468 HERV-K104P61576 105 aa10.09□□□□□ -0.79
PRPF40A-211ENST00000493468 PSMG4Q5JS54 123 aa10.09□□□□□ -0.79
PRPF40A-211ENST00000493468 PRSS48Q7RTY5 328 aa10.09□□□□□ -0.79
PRPF40A-211ENST00000493468 C15orf53Q8NAA6 179 aa10.09□□□□□ -0.79
PRPF40A-211ENST00000493468 TSPAN14Q8NG11 270 aa10.09□□□□□ -0.79
PRPF40A-211ENST00000493468 OR5AP2Q8NGF4 316 aa10.09□□□□□ -0.79
PRPF40A-211ENST00000493468 NARS2Q96I59 477 aaKnown RBP10.09□□□□□ -0.79
PRPF40A-211ENST00000493468 FAM212BQ9NTI7 297 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms