RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 THYN1Q9P016 225 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 TSSC4Q9Y5U2 329 aaPredicted RBP12.25□□□□□ -0.45
HPS4-216ENST00000493455 MFSD2BA6NFX1 497 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 FAM223BA6NKX1 122 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 INS-IGF2F8WCM5 200 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 RLN2P04090 185 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 OPRK1P41145 380 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 CAV2P51636 162 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 RPP30P78346 268 aaKnown RBP12.24□□□□□ -0.45
HPS4-216ENST00000493455 IL15RAQ13261 267 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 DEFB136Q30KP8 78 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 C2orf83Q53S99 150 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 FAM223AQ8IWN6 122 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 UBAC2Q8NBM4 344 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 NECAP1Q8NC96 275 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 RAB40CQ96S21 281 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 CITED1Q99966 193 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 STRAPQ9Y3F4 350 aaKnown RBP12.24□□□□□ -0.45
HPS4-216ENST00000493455 U3KQ87 197 aa12.24□□□□□ -0.45
HPS4-216ENST00000493455 TRBV9A0A0B4J1U6 114 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 A0A0G2JLM5 398 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 C15orf62A8K5M9 175 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 TMEM50AO95807 157 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 MT-CO2P00403 227 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 RAB11AP62491 216 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 OR8G2PQ6IF36 304 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 C8orf86Q6ZUL3 223 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 CHAC2Q8WUX2 184 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 TMEM170AQ8WVE7 144 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 SMIM8Q96KF7 97 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 DUX3Q96PT4 197 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 ZC4H2Q9NQZ6 224 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 ZFP57Q9NU63 452 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 OR5AC2Q9NZP5 309 aa12.23□□□□□ -0.45
HPS4-216ENST00000493455 FAM24AA6NFZ4 105 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 DEDDO75618 318 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 CCNKO75909 580 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 MPC2O95563 127 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 GIPP09681 153 aaPredicted RBP12.22□□□□□ -0.45
HPS4-216ENST00000493455 PAX9P55771 341 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 KIAA0141Q14154 515 aaPredicted RBP12.22□□□□□ -0.45
HPS4-216ENST00000493455 MLANAQ16655 118 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 BSXQ3C1V8 233 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 SHISA2Q6UWI4 295 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 ETV3LQ6ZN32 361 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 NOXA1Q86UR1 476 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 NDUFA11Q86Y39 141 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 RNF152Q8N8N0 203 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 EEF1AKMT3Q96AZ1 226 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 USMG5Q96IX5 58 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 UBE2E2Q96LR5 201 aa12.22□□□□□ -0.45
HPS4-216ENST00000493455 SMLR1H3BR10 107 aa12.21□□□□□ -0.45
HPS4-216ENST00000493455 CORTO00230 105 aa12.21□□□□□ -0.45
HPS4-216ENST00000493455 METTL15P1P0C7V9 234 aa12.21□□□□□ -0.45
HPS4-216ENST00000493455 PET100P0DJ07 73 aa12.21□□□□□ -0.45
HPS4-216ENST00000493455 CDX1P47902 265 aaPredicted RBP12.21□□□□□ -0.45
HPS4-216ENST00000493455 Q56UQ5 140 aa12.21□□□□□ -0.45
HPS4-216ENST00000493455 ACSM6Q6P461 480 aa12.21□□□□□ -0.45
HPS4-216ENST00000493455 CLEC19AQ6UXS0 136 aa12.21□□□□□ -0.45
HPS4-216ENST00000493455 MYOZ3Q8TDC0 251 aa12.21□□□□□ -0.45
HPS4-216ENST00000493455 DCUN1D4Q92564 292 aa12.21□□□□□ -0.45
HPS4-216ENST00000493455 MBD2Q9UBB5 411 aa12.21□□□□□ -0.45
HPS4-216ENST00000493455 COL6A5A8TX70 2615 aa12.21□□□□□ -0.46
HPS4-216ENST00000493455 H0YIZ8 118 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 I3L2K1 104 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 K7EIM0 57 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 TSC22D2O75157 780 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 LY86O95711 162 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 LGALS1P09382 135 aaKnown RBP12.2□□□□□ -0.46
HPS4-216ENST00000493455 RAP2BP61225 183 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 OR2T35Q8NGX2 323 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 THAP6Q8TBB0 222 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 SCARB1Q8WTV0 552 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 C4orf3Q8WVX3 66 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 CXorf58Q96LI9 332 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 FNDC4Q9H6D8 234 aaPredicted RBP12.2□□□□□ -0.46
HPS4-216ENST00000493455 C21orf62Q9NYP8 219 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 TENM1Q9UKZ4 2725 aa12.2□□□□□ -0.46
HPS4-216ENST00000493455 TRAV14DV4A0A0A6YYC5 116 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 RPS10-NUDT3A0A1W2PQS6 291 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 SMCO3A2RU48 225 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 ADARB2-AS1A8MUL3 147 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 E5RGE8 158 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 PPP5D1E7EU14 171 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 CST7O76096 145 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 BRI3O95415 125 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 TRBV12-3P01733 135 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 GPR183P32249 361 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 TAS2R30P59541 319 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 Q5BKY6 102 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 PRSS54Q6PEW0 395 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 SLC16A13Q7RTY0 426 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 TMEM217Q8N7C4 229 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 RNASEH2CQ8TDP1 164 aaKnown RBP12.19□□□□□ -0.46
HPS4-216ENST00000493455 ACY3Q96HD9 319 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 CCDC140Q96MF4 163 aa12.19□□□□□ -0.46
HPS4-216ENST00000493455 RANGRFQ9HD47 186 aaPredicted RBP12.19□□□□□ -0.46
HPS4-216ENST00000493455 IGHV4OR15-8A0A075B7B6 117 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 A0A087WW49 117 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 FXYD6-FXYD2A0A087WZ82 144 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms