RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ZNF833PQ6ZTB9 187 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 SSX9Q7RTT3 188 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF695Q8IW36 515 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 Q8IYB0 196 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 SAXO1Q8IYX7 474 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 GVQW1Q8N7I0 195 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 CHST4Q8NCG5 386 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 LFNGQ8NES3 379 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 OR11H1Q8NG94 326 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 OR4X2Q8NGF9 303 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF596Q8TC21 504 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 TRUB1Q8WWH5 349 aaKnown RBP2.09□□□□□ -2.07
PTCD3-218ENST00000493430 PHYHIPQ92561 330 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 DLX4Q92988 240 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-218ENST00000493430 SLC25A38Q96DW6 304 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 MRPL53Q96EL3 112 aaKnown RBP2.09□□□□□ -2.07
PTCD3-218ENST00000493430 Q96MT0 163 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 FUNDC2Q9BWH2 189 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 NAA50Q9GZZ1 169 aaKnown RBP2.09□□□□□ -2.07
PTCD3-218ENST00000493430 OR2D2Q9H210 308 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 VCX2Q9H322 139 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 FNDC4Q9H6D8 234 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-218ENST00000493430 PLGRKTQ9HBL7 147 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 IL36GQ9NZH8 169 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 ENOPH1Q9UHY7 261 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 TSSC4Q9Y5U2 329 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-218ENST00000493430 ETV7Q9Y603 341 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 RYR2Q92736 4967 aa2.09□□□□□ -2.08
PTCD3-218ENST00000493430 CSMD3Q7Z407 3707 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 MUC4Q99102 2169 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 IGHV3-49A0A0A0MS15 119 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 TRAV41A0A0B4J266 112 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 LOC100506127A0A0U1RQW1 187 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 TEX48A0A1B0GUV7 120 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 XKRY2A2RUG3 117 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 H0Y8G0 127 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 K7EQM0 130 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 SLC17A2O00624 439 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 SLC22A1O15245 554 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 NBR2O15453 112 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF207O43670 478 aaKnown RBP2.08□□□□□ -2.08
PTCD3-218ENST00000493430 MPZL2O60487 215 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 RAMP3O60896 148 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 SC5DO75845 299 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 S1PR2O95136 353 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 ATP6V1G2O95670 118 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 CRYZL1O95825 349 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 NAPSAO96009 420 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 MOSP00540 346 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 IGHV3-48P01763 117 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 GAPDHP04406 335 aaKnown RBP2.08□□□□□ -2.08
PTCD3-218ENST00000493430 FCGR3AP08637 254 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 UCHL1P09936 223 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 OR8U9P0C7N5 309 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 ELK1P19419 428 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 PSMB8P28062 276 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 BRS3P32247 399 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 CEACAM3P40198 252 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 MEOX2P50222 304 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 HNRNPA3P51991 378 aaKnown RBP2.08□□□□□ -2.08
PTCD3-218ENST00000493430 PRRX1P54821 245 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 FXYD4P59646 89 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 OR2B8PP59922 312 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 EMX1Q04741 257 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-218ENST00000493430 TNFRSF9Q07011 255 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 PLGLAQ15195 96 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 PSG5Q15238 335 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 RAB11BQ15907 218 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 C5orf64Q2M2E5 130 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 MPV17LQ2QL34 196 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 C1orf100Q5SVJ3 147 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 TTC23Q5W5X9 447 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 OR52W1Q6IF63 320 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF880Q6PDB4 577 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF773Q6PK81 442 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 UNQ5815/PRO19632Q6UWF5 114 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 PPP1R27Q86WC6 154 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 SBSPONQ8IVN8 264 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 GAPTQ8N292 157 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF491Q8N8L2 437 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 OR4F17Q8NGA8 305 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 OR2T10Q8NGZ9 312 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 OR8U1Q8NH10 309 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 GTSF1Q8WW33 167 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 TMEM37Q8WXS4 190 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 UFD1Q92890 307 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 FAM3DQ96BQ1 224 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 C10orf35Q96D05 121 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 MRPS24Q96EL2 167 aaKnown RBP2.08□□□□□ -2.08
PTCD3-218ENST00000493430 CXorf58Q96LI9 332 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 OR4F4Q96R69 305 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 S100A13Q99584 98 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 MGLLQ99685 303 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 RASL11BQ9BPW5 248 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 NDUFAF3Q9BU61 184 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 MND1Q9BWT6 205 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 TM2D1Q9BX74 207 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 FXYD6Q9H0Q3 95 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 ABCG5Q9H222 651 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 OR51J1Q9H342 316 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms