RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 VDAC2P45880 294 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 TNXAQ16473 311 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 C5orf64Q2M2E5 130 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 LRRC75BQ2VPJ9 315 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 RNF212Q495C1 297 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 SPANXN5Q5MJ07 72 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 HIST1H2BAQ96A08 127 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 ATP5SQ99766 215 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 NDUFA4L2Q9NRX3 87 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 RFNGQ9Y644 331 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 SVEP1Q4LDE5 3571 aa11.22□□□□□ -0.61
PDZRN3-210ENST00000492909 M0R036 132 aa11.22□□□□□ -0.61
PDZRN3-210ENST00000492909 FOSL1P15407 271 aa11.22□□□□□ -0.61
PDZRN3-210ENST00000492909 RAB5BP61020 215 aa11.22□□□□□ -0.61
PDZRN3-210ENST00000492909 RHEBQ15382 184 aa11.22□□□□□ -0.61
PDZRN3-210ENST00000492909 DPPA3Q6W0C5 159 aa11.22□□□□□ -0.61
PDZRN3-210ENST00000492909 STX12Q86Y82 276 aa11.22□□□□□ -0.61
PDZRN3-210ENST00000492909 TLN2Q9Y4G6 2542 aa11.22□□□□□ -0.61
PDZRN3-210ENST00000492909 RBFOX3A6NFN3 312 aa11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 DFFBO76075 338 aa11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 MT-ND4LP03901 98 aa11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 AKR1C3P42330 323 aa11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 COMPP49747 757 aaPredicted RBP11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 SULT1A1P50225 295 aa11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 GNB1P62873 340 aa11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 RPP30P78346 268 aaKnown RBP11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 C10orf55Q5SWW7 151 aa11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 C9orf139Q6ZV77 190 aa11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 PIFOQ8TCI5 191 aa11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 C22orf15Q8WYQ4 148 aa11.21□□□□□ -0.61
PDZRN3-210ENST00000492909 TEP1Q99973 2627 aaKnown RBP11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 A0A1B0GV50 99 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 A0A1W2PN81 502 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 E7EUB6 86 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 H3BUX3 64 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 FCN1O00602 326 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 CA2P00918 260 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 IFNA10P01566 189 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 IFNA4P05014 189 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 CHRNA7P36544 502 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 RPL35P42766 123 aaKnown RBP11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 RPL27AP46776 148 aaKnown RBP11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 CCL20P78556 96 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 TMEM267Q0VDI3 215 aaPredicted RBP11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 DEFB112Q30KQ8 113 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 TMEM14EPQ6UXP3 125 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 BCL6BQ8N143 479 aaPredicted RBP11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 TMEM217Q8N7C4 229 aa11.21□□□□□ -0.62
PDZRN3-210ENST00000492909 C1orf196B1AJZ1 125 aa11.2□□□□□ -0.62
PDZRN3-210ENST00000492909 METTL15P1P0C7V9 234 aa11.2□□□□□ -0.62
PDZRN3-210ENST00000492909 OR13C7P0DN81 318 aa11.2□□□□□ -0.62
PDZRN3-210ENST00000492909 AKR1C8PQ5T2L2 129 aa11.2□□□□□ -0.62
PDZRN3-210ENST00000492909 ZFP82Q8N141 532 aa11.2□□□□□ -0.62
PDZRN3-210ENST00000492909 Q8N9W7 124 aa11.2□□□□□ -0.62
PDZRN3-210ENST00000492909 OR10W1Q8NGF6 305 aa11.2□□□□□ -0.62
PDZRN3-210ENST00000492909 C2CD4CQ8TF44 421 aa11.2□□□□□ -0.62
PDZRN3-210ENST00000492909 RBM14Q96PK6 669 aaKnown RBP11.2□□□□□ -0.62
PDZRN3-210ENST00000492909 OR4C12Q96R67 309 aa11.2□□□□□ -0.62
PDZRN3-210ENST00000492909 RARRES2Q99969 163 aa11.2□□□□□ -0.62
PDZRN3-210ENST00000492909 MDFIC2A0A1B0GVS7 189 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 CGB1A6NKQ9 187 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 CNIH1O95406 144 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 HBE1P02100 147 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 AKR1D1P51857 326 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 HBG1P69891 147 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 HBG2P69892 147 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 SSBP2P81877 361 aaPredicted RBP11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 RUNX1Q01196 453 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 SOHLH1Q5JUK2 328 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 IQCF2Q8IXL9 164 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 MRPL41Q8IXM3 137 aaKnown RBP11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 SLC24A4Q8NFF2 622 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 SRSF12Q8WXF0 261 aaKnown RBP11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 RASL11BQ9BPW5 248 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 SLC25A33Q9BSK2 321 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 C20orf24Q9BUV8 137 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 PITPNC1Q9UKF7 332 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 NAV3Q8IVL0 2385 aa11.19□□□□□ -0.62
PDZRN3-210ENST00000492909 ZNF98A6NK75 572 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 C15orf62A8K5M9 175 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 IFNA5P01569 189 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 RAB2AP61019 212 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 ERHP84090 104 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 ZNF506Q5JVG8 444 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 ZNF562Q6V9R5 426 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 TMEM219Q86XT9 240 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 YAE1D1Q9NRH1 226 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 MOB4Q9Y3A3 225 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 SCAF4O95104 1147 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 HLA-DRB1P01911 266 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 NPY1RP25929 384 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 FXYD3Q14802 87 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 OR8G2PQ6IF36 304 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 SFT2D1Q8WV19 159 aa11.18□□□□□ -0.62
PDZRN3-210ENST00000492909 TRAV1-1A0A0B4J248 108 aa11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 A6NDX4 124 aa11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 HSPB1P04792 205 aaKnown RBP11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 OR8U8P0C7N1 319 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms