RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 UCP1P25874 307 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 MFAP4P55083 255 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 ERHP84090 104 aaKnown RBP11.23□□□□□ -0.61
TOM1-215ENST00000491987 SLC35G3Q8N808 338 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 PINX1Q96BK5 328 aaKnown RBP11.23□□□□□ -0.61
TOM1-215ENST00000491987 HIPK2Q9H2X6 1198 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 C14orf166Q9Y224 244 aaKnown RBP11.23□□□□□ -0.61
TOM1-215ENST00000491987 A0A0G2JRQ6 117 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 H3BMQ9 156 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 CTDSPLO15194 276 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 NUPL2O15504 423 aaKnown RBP11.22□□□□□ -0.61
TOM1-215ENST00000491987 IFNA17P01571 189 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 CTSGP08311 255 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 AKAIN1P0CW23 69 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 RPL5P46777 297 aaKnown RBP11.22□□□□□ -0.61
TOM1-215ENST00000491987 ANKRD55Q3KP44 614 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 ZFAND6Q6FIF0 208 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 OR4C16Q8NGL9 310 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 RNASE11Q8TAA1 199 aaKnown RBP11.22□□□□□ -0.61
TOM1-215ENST00000491987 RRNAD1Q96FB5 475 aaKnown RBP11.22□□□□□ -0.61
TOM1-215ENST00000491987 ZNF414Q96IQ9 312 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 PDCD10Q9BUL8 212 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 C5orf66Q9H5L9 145 aa11.22□□□□□ -0.61
TOM1-215ENST00000491987 GAR1Q9NY12 217 aaKnown RBP11.22□□□□□ -0.61
TOM1-215ENST00000491987 OR5AC1P0C628 307 aa11.21□□□□□ -0.61
TOM1-215ENST00000491987 FCGR2BP31994 310 aaPredicted RBP11.21□□□□□ -0.61
TOM1-215ENST00000491987 HOXA1P49639 335 aaPredicted RBP11.21□□□□□ -0.61
TOM1-215ENST00000491987 TXN2Q99757 166 aa11.21□□□□□ -0.61
TOM1-215ENST00000491987 RTBDNQ9BSG5 229 aaPredicted RBP11.21□□□□□ -0.61
TOM1-215ENST00000491987 SLIRPQ9GZT3 109 aaKnown RBP11.21□□□□□ -0.61
TOM1-215ENST00000491987 NAA60Q9H7X0 242 aa11.21□□□□□ -0.61
TOM1-215ENST00000491987 RABL2AQ9UBK7 228 aaPredicted RBP11.21□□□□□ -0.61
TOM1-215ENST00000491987 RABL2BQ9UNT1 228 aa11.21□□□□□ -0.61
TOM1-215ENST00000491987 TEX13DA0A0J9YY54 714 aaPredicted RBP11.2□□□□□ -0.62
TOM1-215ENST00000491987 K7EMT4 169 aa11.2□□□□□ -0.62
TOM1-215ENST00000491987 TSPAN4O14817 238 aa11.2□□□□□ -0.62
TOM1-215ENST00000491987 GNG7O60262 68 aa11.2□□□□□ -0.62
TOM1-215ENST00000491987 B3GALNT1O75752 331 aa11.2□□□□□ -0.62
TOM1-215ENST00000491987 YIF1AO95070 293 aa11.2□□□□□ -0.62
TOM1-215ENST00000491987 SNCAP37840 140 aa11.2□□□□□ -0.62
TOM1-215ENST00000491987 ETV6P41212 452 aa11.2□□□□□ -0.62
TOM1-215ENST00000491987 RELQ04864 619 aaPredicted RBP11.2□□□□□ -0.62
TOM1-215ENST00000491987 LAMTOR1Q6IAA8 161 aa11.2□□□□□ -0.62
TOM1-215ENST00000491987 SPAG8Q99932 426 aaPredicted RBP11.2□□□□□ -0.62
TOM1-215ENST00000491987 TMEM222Q9H0R3 208 aa11.2□□□□□ -0.62
TOM1-215ENST00000491987 UBQLN2Q9UHD9 624 aa11.2□□□□□ -0.62
TOM1-215ENST00000491987 ANKRD20A5PA0PJZ0 165 aa11.19□□□□□ -0.62
TOM1-215ENST00000491987 C15orf62A8K5M9 175 aa11.19□□□□□ -0.62
TOM1-215ENST00000491987 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
TOM1-215ENST00000491987 GSTZ1O43708 216 aaPredicted RBP11.19□□□□□ -0.62
TOM1-215ENST00000491987 SURF2Q15527 256 aaPredicted RBP11.19□□□□□ -0.62
TOM1-215ENST00000491987 OR51S1Q8NGJ8 323 aa11.19□□□□□ -0.62
TOM1-215ENST00000491987 MCFD2Q8NI22 146 aa11.19□□□□□ -0.62
TOM1-215ENST00000491987 LHFPL5Q8TAF8 219 aa11.19□□□□□ -0.62
TOM1-215ENST00000491987 GLYATL2Q8WU03 294 aa11.19□□□□□ -0.62
TOM1-215ENST00000491987 PRRT1Q99946 306 aa11.19□□□□□ -0.62
TOM1-215ENST00000491987 GGTLC1Q9BX51 225 aa11.19□□□□□ -0.62
TOM1-215ENST00000491987 NXF2Q9GZY0 626 aaKnown RBP11.19□□□□□ -0.62
TOM1-215ENST00000491987 ENY2Q9NPA8 101 aa11.19□□□□□ -0.62
TOM1-215ENST00000491987 RSL24D1Q9UHA3 163 aaKnown RBP11.19□□□□□ -0.62
TOM1-215ENST00000491987 GPR132Q9UNW8 380 aa11.19□□□□□ -0.62
TOM1-215ENST00000491987 LOC102724200A0A096LPH7 203 aaPredicted RBP11.18□□□□□ -0.62
TOM1-215ENST00000491987 IGHV3-49A0A0A0MS15 119 aa11.18□□□□□ -0.62
TOM1-215ENST00000491987 IGHV7-4-1A0A0J9YVY3 117 aa11.18□□□□□ -0.62
TOM1-215ENST00000491987 CRYM-AS1A6NIL9 109 aa11.18□□□□□ -0.62
TOM1-215ENST00000491987 CDS2O95674 445 aa11.18□□□□□ -0.62
TOM1-215ENST00000491987 RNASE2P10153 161 aaKnown RBP11.18□□□□□ -0.62
TOM1-215ENST00000491987 TNFSF8P32971 234 aa11.18□□□□□ -0.62
TOM1-215ENST00000491987 Q6ZRM9 215 aa11.18□□□□□ -0.62
TOM1-215ENST00000491987 SELENOHQ8IZQ5 122 aaKnown RBP11.18□□□□□ -0.62
TOM1-215ENST00000491987 RBPMSQ93062 196 aaKnown RBP11.18□□□□□ -0.62
TOM1-215ENST00000491987 RHPN1-AS1Q9BWJ2 59 aa11.18□□□□□ -0.62
TOM1-215ENST00000491987 SMPXQ9UHP9 88 aa11.18□□□□□ -0.62
TOM1-215ENST00000491987 STARD9Q9P2P6 4700 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 FABP12A6NFH5 140 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 OR4C46A6NHA9 309 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 NPBWR1P48145 328 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 SUB1P53999 127 aaKnown RBP eCLIP11.17□□□□□ -0.62
TOM1-215ENST00000491987 DHODHQ02127 395 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 TMEM268Q5VZI3 342 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 FAM219AQ8IW50 185 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 TMEM116Q8NCL8 245 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 DUSP18Q8NEJ0 188 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 OR10C1Q96KK4 312 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 RNF2Q99496 336 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 SOSTQ9BQB4 213 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 MCUBQ9NWR8 336 aa11.17□□□□□ -0.62
TOM1-215ENST00000491987 IGHV3OR16-13A0A075B7E8 117 aa11.16□□□□□ -0.62
TOM1-215ENST00000491987 IGHV3-74A0A0B4J1X5 117 aa11.16□□□□□ -0.62
TOM1-215ENST00000491987 CORTO00230 105 aa11.16□□□□□ -0.62
TOM1-215ENST00000491987 CHEK1O14757 476 aa11.16□□□□□ -0.62
TOM1-215ENST00000491987 SPCS3P61009 180 aa11.16□□□□□ -0.62
TOM1-215ENST00000491987 ODF3L2Q3SX64 289 aa11.16□□□□□ -0.62
TOM1-215ENST00000491987 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.16□□□□□ -0.62
TOM1-215ENST00000491987 PRR13Q9NZ81 148 aa11.16□□□□□ -0.62
TOM1-215ENST00000491987 CACNG5Q9UF02 275 aa11.16□□□□□ -0.62
TOM1-215ENST00000491987 SCP2D1Q9UJQ7 156 aa11.16□□□□□ -0.62
TOM1-215ENST00000491987 IGKV3-7A0A075B6H7 116 aa11.15□□□□□ -0.62
TOM1-215ENST00000491987 TRAV14DV4A0A0A6YYC5 116 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms