RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 ZNF665Q9H7R5 613 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 HES4Q9HCC6 221 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 DNAJC4Q9NNZ3 241 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 OSTCQ9NRP0 149 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM167BQ9NRX6 74 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TECRQ9NZ01 308 aaKnown RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 IL36BQ9NZH7 164 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF581Q9P0T4 197 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 IL19Q9UHD0 177 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 NAGKQ9UJ70 344 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 FUT9Q9Y231 359 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 GOLT1BQ9Y3E0 138 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TBL2Q9Y4P3 447 aaKnown RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 SMAD5-AS1Q9Y6J3 95 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 U3KQA8 63 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ARL2-SNX15V9GYD0 113 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 DSCAML1Q8TD84 2053 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 KNTC1P50748 2209 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 SDK1Q7Z5N4 2213 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 DSCAMO60469 2012 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TNRC6BQ9UPQ9 1833 aaKnown RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 MED13Q9UHV7 2174 aa1.65□□□□□ -2.14
SNRNP40-207ENST00000491106 CENPFP49454 3210 aa1.65□□□□□ -2.14
SNRNP40-207ENST00000491106 CACNA1EQ15878 2313 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 IGLV5-45A0A087WSX0 123 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A0G2JRQ6 117 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 MDFIC2A0A1B0GVS7 189 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A1W2PPQ1 181 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A1W2PRE2 83 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 LNP1A1A4G5 178 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 IZUMO1RA6ND01 250 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 DPRXA6NFQ7 191 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 C17orf98A8MV24 154 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 SMIM1B2RUZ4 78 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 C21orf140B9A014 251 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 TEX22C9J3V5 150 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 C12orf77C9JDV5 145 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 INS-IGF2F8WCM5 200 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 SIRPB1O00241 398 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 FCN1O00602 326 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ISLRO14498 428 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNHIT1O43257 154 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 DLEU1O43261 78 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 NUPR1O60356 82 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF253O75346 499 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 RHBDL1O75783 438 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 HAND1O96004 215 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 LHBP01229 141 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 IGKV1D-33P01593 117 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 IGKV1-33P01594 117 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 HBZP02008 142 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 OR4A8P0C604 315 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 OR5AL1P0C617 328 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 LINC00869P0C866 280 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 IAPPP10997 89 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 CCL2P13500 99 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF25P17030 456 aaPredicted RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 PMCHP20382 165 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 EDN2P20800 178 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 CD82P27701 267 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 OTX2P32243 289 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 DUTP33316 252 aaKnown RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 G6PCP35575 357 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 TIMP3P35625 211 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 CHRNA7P36544 502 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 VDAC2P45880 294 aaPredicted RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 OR3A1P47881 315 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 PPOXP50336 477 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 RAB7AP51149 207 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 TDGF1P3P51864 188 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 BRWD1-AS2P59051 145 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 TAS2R45P59539 299 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 RPS20P60866 119 aaKnown RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ERVK-16P61578 105 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 GNB1P62873 340 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 RPL30P62888 115 aaKnown RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 RPL31P62899 125 aaKnown RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 CX3CL1P78423 397 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 AESQ08117 197 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 PSG7Q13046 419 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 P2RY6Q15077 328 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 PMCHL1Q16048 86 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 POU2AF1Q16633 256 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 RPEL1Q2QD12 228 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 HLA-DRB5Q30154 266 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 TIGITQ495A1 244 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 PDZD11Q5EBL8 140 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 PSMG4Q5JS54 123 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 COL5A1-AS1Q5SY13 56 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM78BQ5VT40 261 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 TEX38Q6PEX7 206 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 PET117Q6UWS5 81 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 TOMM20LQ6UXN7 152 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ACP7Q6ZNF0 438 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 PQLC2Q6ZP29 291 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 SMIM29Q86T20 159 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 LRP11Q86VZ4 500 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 BAGE3Q86Y29 109 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 BAGE2Q86Y30 109 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms