RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 RAX2Q96IS3 184 aa12.24□□□□□ -0.45
TRA2A-208ENST00000490942 OR10C1Q96KK4 312 aa12.24□□□□□ -0.45
TRA2A-208ENST00000490942 RBKSQ9H477 322 aa12.24□□□□□ -0.45
TRA2A-208ENST00000490942 WNK1Q9H4A3 2382 aa12.24□□□□□ -0.45
TRA2A-208ENST00000490942 GAR1Q9NY12 217 aaKnown RBP12.24□□□□□ -0.45
TRA2A-208ENST00000490942 PEF1Q9UBV8 284 aaKnown RBP12.24□□□□□ -0.45
TRA2A-208ENST00000490942 MPTX1A8MV57 137 aa12.23□□□□□ -0.45
TRA2A-208ENST00000490942 PF4P02776 101 aa12.23□□□□□ -0.45
TRA2A-208ENST00000490942 ZP3P21754 424 aa12.23□□□□□ -0.45
TRA2A-208ENST00000490942 SPINK9Q5DT21 86 aa12.23□□□□□ -0.45
TRA2A-208ENST00000490942 HIST2H2BDQ6DRA6 164 aa12.23□□□□□ -0.45
TRA2A-208ENST00000490942 GSG1LQ6UXU4 331 aa12.23□□□□□ -0.45
TRA2A-208ENST00000490942 C19orf35Q6ZS72 473 aa12.23□□□□□ -0.45
TRA2A-208ENST00000490942 ZBTB8BQ8NAP8 495 aaPredicted RBP12.23□□□□□ -0.45
TRA2A-208ENST00000490942 UXS1Q8NBZ7 420 aa12.23□□□□□ -0.45
TRA2A-208ENST00000490942 RNASEH2CQ8TDP1 164 aaKnown RBP12.23□□□□□ -0.45
TRA2A-208ENST00000490942 DPF1Q92782 380 aa12.23□□□□□ -0.45
TRA2A-208ENST00000490942 C2orf50Q96LR7 162 aa12.23□□□□□ -0.45
TRA2A-208ENST00000490942 LINC01619G3V211 115 aa12.22□□□□□ -0.45
TRA2A-208ENST00000490942 K7EIM0 57 aa12.22□□□□□ -0.45
TRA2A-208ENST00000490942 IGHV3-11P01762 117 aa12.22□□□□□ -0.45
TRA2A-208ENST00000490942 RPP30P78346 268 aaKnown RBP12.22□□□□□ -0.45
TRA2A-208ENST00000490942 LINC00482Q8N8I6 264 aa12.22□□□□□ -0.45
TRA2A-208ENST00000490942 ZNF502Q8TBZ5 544 aa12.22□□□□□ -0.45
TRA2A-208ENST00000490942 TXN2Q99757 166 aa12.22□□□□□ -0.45
TRA2A-208ENST00000490942 C5orf51A6NDU8 294 aa12.21□□□□□ -0.45
TRA2A-208ENST00000490942 I3L2K1 104 aa12.21□□□□□ -0.45
TRA2A-208ENST00000490942 NPY1RP25929 384 aa12.21□□□□□ -0.45
TRA2A-208ENST00000490942 TAS2R30P59541 319 aa12.21□□□□□ -0.45
TRA2A-208ENST00000490942 CYCSP99999 105 aaKnown RBP12.21□□□□□ -0.45
TRA2A-208ENST00000490942 IL15RAQ13261 267 aa12.21□□□□□ -0.45
TRA2A-208ENST00000490942 TREML4Q6UXN2 200 aa12.21□□□□□ -0.45
TRA2A-208ENST00000490942 SCARB1Q8WTV0 552 aa12.21□□□□□ -0.45
TRA2A-208ENST00000490942 OR5B12Q96R08 314 aa12.21□□□□□ -0.45
TRA2A-208ENST00000490942 RAB40CQ96S21 281 aa12.21□□□□□ -0.45
TRA2A-208ENST00000490942 C21orf62Q9NYP8 219 aa12.21□□□□□ -0.45
TRA2A-208ENST00000490942 RPS10-NUDT3A0A1W2PQS6 291 aa12.2□□□□□ -0.46
TRA2A-208ENST00000490942 MFSD2BA6NFX1 497 aa12.2□□□□□ -0.46
TRA2A-208ENST00000490942 WRBO00258 174 aa12.2□□□□□ -0.46
TRA2A-208ENST00000490942 SSNA1O43805 119 aa12.2□□□□□ -0.46
TRA2A-208ENST00000490942 IFNA10P01566 189 aa12.2□□□□□ -0.46
TRA2A-208ENST00000490942 DEFB136Q30KP8 78 aa12.2□□□□□ -0.46
TRA2A-208ENST00000490942 ETFRF1Q6IPR1 90 aa12.2□□□□□ -0.46
TRA2A-208ENST00000490942 SPSB3Q6PJ21 355 aa12.2□□□□□ -0.46
TRA2A-208ENST00000490942 SMIM8Q96KF7 97 aa12.2□□□□□ -0.46
TRA2A-208ENST00000490942 CCDC140Q96MF4 163 aa12.2□□□□□ -0.46
TRA2A-208ENST00000490942 GSKIPQ9P0R6 139 aa12.2□□□□□ -0.46
TRA2A-208ENST00000490942 IGHV4OR15-8A0A075B7B6 117 aa12.19□□□□□ -0.46
TRA2A-208ENST00000490942 A0A087WW49 117 aa12.19□□□□□ -0.46
TRA2A-208ENST00000490942 FAM25EA8MYX2 175 aa12.19□□□□□ -0.46
TRA2A-208ENST00000490942 CCSO14618 274 aa12.19□□□□□ -0.46
TRA2A-208ENST00000490942 NXPH3O95157 252 aa12.19□□□□□ -0.46
TRA2A-208ENST00000490942 MT-CO2P00403 227 aa12.19□□□□□ -0.46
TRA2A-208ENST00000490942 RAB11AP62491 216 aa12.19□□□□□ -0.46
TRA2A-208ENST00000490942 MISP3Q96FF7 219 aa12.19□□□□□ -0.46
TRA2A-208ENST00000490942 BSCL2Q96G97 398 aaPredicted RBP12.19□□□□□ -0.46
TRA2A-208ENST00000490942 MCRIP2Q9BUT9 160 aaKnown RBP12.19□□□□□ -0.46
TRA2A-208ENST00000490942 NMES1Q9C002 83 aa12.19□□□□□ -0.46
TRA2A-208ENST00000490942 ALG5Q9Y673 324 aa12.19□□□□□ -0.46
TRA2A-208ENST00000490942 TSC22D2O75157 780 aa12.18□□□□□ -0.46
TRA2A-208ENST00000490942 GGCTO75223 188 aaKnown RBP12.18□□□□□ -0.46
TRA2A-208ENST00000490942 MBPP02686 304 aaPredicted RBP12.18□□□□□ -0.46
TRA2A-208ENST00000490942 SLC25A4P12235 298 aa12.18□□□□□ -0.46
TRA2A-208ENST00000490942 HOXD3P31249 432 aaPredicted RBP12.18□□□□□ -0.46
TRA2A-208ENST00000490942 MFAP4P55083 255 aa12.18□□□□□ -0.46
TRA2A-208ENST00000490942 POLR2GP62487 172 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRA2A-208ENST00000490942 DEFA5Q01523 94 aa12.18□□□□□ -0.46
TRA2A-208ENST00000490942 TMEM170AQ8WVE7 144 aa12.18□□□□□ -0.46
TRA2A-208ENST00000490942 CACNG8Q8WXS5 425 aa12.18□□□□□ -0.46
TRA2A-208ENST00000490942 RCC1LQ96I51 464 aaKnown RBP12.18□□□□□ -0.46
TRA2A-208ENST00000490942 GPR61Q9BZJ8 451 aa12.18□□□□□ -0.46
TRA2A-208ENST00000490942 MAGT1Q9H0U3 335 aa12.18□□□□□ -0.46
TRA2A-208ENST00000490942 MGAM2Q2M2H8 2515 aa12.18□□□□□ -0.46
TRA2A-208ENST00000490942 BMPR1BO00238 502 aa12.17□□□□□ -0.46
TRA2A-208ENST00000490942 GOSR2O14653 212 aa12.17□□□□□ -0.46
TRA2A-208ENST00000490942 SCGB2A1O75556 95 aa12.17□□□□□ -0.46
TRA2A-208ENST00000490942 SCAF4O95104 1147 aaKnown RBP12.17□□□□□ -0.46
TRA2A-208ENST00000490942 CLEC3BP05452 202 aa12.17□□□□□ -0.46
TRA2A-208ENST00000490942 GPX4P36969 197 aaPredicted RBP12.17□□□□□ -0.46
TRA2A-208ENST00000490942 OPRK1P41145 380 aa12.17□□□□□ -0.46
TRA2A-208ENST00000490942 NPBWR1P48145 328 aa12.17□□□□□ -0.46
TRA2A-208ENST00000490942 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
TRA2A-208ENST00000490942 GPHB5Q86YW7 130 aa12.17□□□□□ -0.46
TRA2A-208ENST00000490942 ASB13Q8WXK3 278 aa12.17□□□□□ -0.46
TRA2A-208ENST00000490942 RCL1Q9Y2P8 373 aaKnown RBP12.17□□□□□ -0.46
TRA2A-208ENST00000490942 TRRAPQ9Y4A5 3859 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 ANKRD34BA5PLL1 514 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 C15orf62A8K5M9 175 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 F8W735 103 aaPredicted RBP12.16□□□□□ -0.46
TRA2A-208ENST00000490942 TGOLN2O43493 480 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 TRBV12-3P01733 135 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 IAPPP10997 89 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 CD33P20138 364 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 PVALBP20472 110 aaPredicted RBP12.16□□□□□ -0.46
TRA2A-208ENST00000490942 ARL3P36405 182 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 CD69Q07108 199 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 KLF5Q13887 457 aaPredicted RBP12.16□□□□□ -0.46
TRA2A-208ENST00000490942 RPEL1Q2QD12 228 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 C1QL4Q86Z23 238 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 TMEM116Q8NCL8 245 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms