RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 FAAP20Q6NZ36 180 aa5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 Q6ZRM9 215 aa5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 LHFPL1Q86WI0 220 aa5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 OR2C3Q8N628 320 aa5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 GDPD1Q8N9F7 314 aa5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 UBAC2Q8NBM4 344 aa5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 VN1R17PQ8TDU5 208 aa5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 CXorf58Q96LI9 332 aa5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 TP53RKQ96S44 253 aa5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 SRSF8Q9BRL6 282 aaKnown RBP5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 SCPEP1Q9HB40 452 aa5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 TECRQ9NZ01 308 aaKnown RBP5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 MTFP1Q9UDX5 166 aa5.45□□□□□ -1.54
PRPF4B-208ENST00000490653 IGHV3OR16-13A0A075B7E8 117 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 IGHV3-74A0A0B4J1X5 117 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 A0A0B4J293 547 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 C15orf61A6NNL5 157 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 A8MWP6 167 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 I3L2K1 104 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 CTSGP08311 255 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 PGAM2P15259 253 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 ETV6P41212 452 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 PPP5CP53041 499 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 PIGPP57054 158 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 HSPE1P61604 102 aaKnown RBP5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 MZT2AQ6P582 158 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 H2BFWTQ7Z2G1 175 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 LAX1Q8IWV1 398 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 CMTM1Q8IZ96 169 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 SLC38A6Q8IZM9 456 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 CADM3Q8N126 398 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 LILRB2Q8N423 598 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 OR52B4Q8NGK2 314 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 MARCH1Q8TCQ1 289 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 LSM10Q969L4 123 aaKnown RBP5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 C20orf24Q9BUV8 137 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 TMEM14BQ9NUH8 114 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 SLC2A8Q9NY64 477 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 C21orf62Q9NYP8 219 aa5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 MRPL36Q9P0J6 103 aaKnown RBP5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 MRPL27Q9P0M9 148 aaKnown RBP5.44□□□□□ -1.54
PRPF4B-208ENST00000490653 MT-CO2P00403 227 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 APOHP02749 345 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 CD74P04233 296 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 IFNA6P05013 189 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 CTSDP07339 412 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 P0C879 139 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 RND3P61587 244 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 EWSR1Q01844 656 aaKnown RBP eCLIP5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 SCGB2B2Q4G0G5 96 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 Q56UQ5 140 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 RNASE10Q5GAN6 216 aaKnown RBP5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 LPCAT3Q6P1A2 487 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 CLVS1Q8IUQ0 354 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 TMEM229BQ8NBD8 167 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 OR4A16Q8NH70 328 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 LHFPL5Q8TAF8 219 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 TMEM190Q8WZ59 177 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 BORCS5Q969J3 196 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 C8orf49Q96NF6 230 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 OVOL2Q9BRP0 275 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 RTBDNQ9BSG5 229 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 MRPS26Q9BYN8 205 aaKnown RBP5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 THYN1Q9P016 225 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 PRNDQ9UKY0 176 aa5.43□□□□□ -1.54
PRPF4B-208ENST00000490653 IGKV3-7A0A075B6H7 116 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 IGHV3-66A0A0C4DH42 116 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 C3orf85A0A1B0GTC6 90 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 NDUFA4O00483 81 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 ST8SIA3O43173 380 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 RAB3DO95716 219 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 FGF2P09038 288 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 TFPI2P48307 235 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 MFAP4P55083 255 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 ELLP55199 621 aaPredicted RBP5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 PRCDQ00LT1 54 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 ODF3L2Q3SX64 289 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 THOC7Q6I9Y2 204 aaKnown RBP5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 STEAP1BQ6NZ63 245 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 RBPMS2Q6ZRY4 209 aaKnown RBP5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 GPR141Q7Z602 305 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 OR13C8Q8NGS7 320 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 OR1P1Q8NH06 330 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 OR5B3Q8NH48 314 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 TERB2Q8NHR7 220 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 DYNC2LI1Q8TCX1 351 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 PINX1Q96BK5 328 aaKnown RBP5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 BSCL2Q96G97 398 aaPredicted RBP5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 TMEM56Q96MV1 263 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 RNF2Q99496 336 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 FNDC4Q9H6D8 234 aaPredicted RBP5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 PALMDQ9NP74 551 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 FAM212BQ9NTI7 297 aaPredicted RBP5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 FKBP11Q9NYL4 201 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 SMPXQ9UHP9 88 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 UFC1Q9Y3C8 167 aa5.42□□□□□ -1.54
PRPF4B-208ENST00000490653 ALMS1Q8TCU4 4167 aa5.41□□□□□ -1.54
PRPF4B-208ENST00000490653 LOC102724200A0A096LPH7 203 aaPredicted RBP5.41□□□□□ -1.54
PRPF4B-208ENST00000490653 TRAV25A0A0B4J276 109 aa5.41□□□□□ -1.54
PRPF4B-208ENST00000490653 GABARAPH6UMI1 98 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms