RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SMIM19Q96E16 107 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 TCEAL4Q96EI5 215 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 CCL13Q99616 98 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 DHRS9Q9BPW9 319 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 AIF1LQ9BQI0 150 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 DDA1Q9BW61 102 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 REG4Q9BYZ8 158 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 TLNRD1Q9H1K6 362 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 SPANXB1Q9NS25 103 aaPredicted RBP0.64□□□□□ -2.31
CCDC39-206ENST00000489868 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.64□□□□□ -2.31
CCDC39-206ENST00000489868 GLTPQ9NZD2 209 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 GSKIPQ9P0R6 139 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 VPS29Q9UBQ0 182 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 SMPXQ9UHP9 88 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 NDUFAF1Q9Y375 327 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 RFX7Q2KHR2 1363 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 KIF24Q5T7B8 1368 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 GLI3P10071 1580 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 PEG3Q9GZU2 1588 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
CCDC39-206ENST00000489868 SETD5Q9C0A6 1442 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 CCDC171Q6TFL3 1326 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 ARHGEF10O15013 1369 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 ABCC11Q96J66 1382 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 TGIF2-C20orf24A0A0A6YYL0 155 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 IGKV1-9A0A0C4DH69 117 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 TEX50A0A1B0GTY4 177 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 SMIM9A6NGZ8 99 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 LINC00587B1AMM8 73 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 ATP6V1G2-DDX39BF2Z307 99 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 CHP2O43745 196 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 CST8O60676 142 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 PFDN1O60925 122 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 DCTN3O75935 186 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 OR2B3O76000 313 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 IFNA1P01562 189 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 APOC1P02654 83 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 CRHP06850 196 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 CST2P09228 141 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 OR10J4P0C629 311 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 HIST1H1EP10412 219 aaKnown RBP0.63□□□□□ -2.31
CCDC39-206ENST00000489868 SCGB1A1P11684 91 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 S100GP29377 79 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 RPL12P30050 165 aaKnown RBP0.63□□□□□ -2.31
CCDC39-206ENST00000489868 SULT1A1P50225 295 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 CRYBA4P53673 196 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 TAS2R41P59536 307 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 TSNQ15631 228 aaKnown RBP0.63□□□□□ -2.31
CCDC39-206ENST00000489868 LIN52Q52LA3 116 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM97Q5BJF2 176 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 RPL13AP3Q6NVV1 102 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 C5orf46Q6UWT4 87 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 IDO2Q6ZQW0 420 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 FAM19A5Q7Z5A7 132 aaPredicted RBP0.63□□□□□ -2.31
CCDC39-206ENST00000489868 COMMD7Q86VX2 200 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 PHF13Q86YI8 300 aaPredicted RBP0.63□□□□□ -2.31
CCDC39-206ENST00000489868 DYNAPQ8N1N2 210 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM86AQ8N2M4 240 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 STX19Q8N4C7 294 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 CLDN22Q8N7P3 220 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 OR10K1Q8NGX5 313 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 HAVCR2Q8TDQ0 301 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 ZHX1-C8orf76Q96EF9 292 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 IMP4Q96G21 291 aaKnown RBP0.63□□□□□ -2.31
CCDC39-206ENST00000489868 ANKRD36BP1Q96IX9 119 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 BTF3L4Q96K17 158 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 PFDN5Q99471 154 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 SIGMAR1Q99720 223 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 CMSS1Q9BQ75 279 aaKnown RBP0.63□□□□□ -2.31
CCDC39-206ENST00000489868 MAP1LC3AQ9H492 121 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 NMNAT1Q9HAN9 279 aaPredicted RBP0.63□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM138Q9NPI0 162 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 BIN3Q9NQY0 253 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 ARMC1Q9NVT9 282 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 OPTCQ9UBM4 332 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 FBXO5Q9UKT4 447 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 UTP11Q9Y3A2 253 aaKnown RBP0.63□□□□□ -2.31
CCDC39-206ENST00000489868 FAM32AQ9Y421 112 aaKnown RBP0.63□□□□□ -2.31
CCDC39-206ENST00000489868 ASB4Q9Y574 426 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 NUBP2Q9Y5Y2 271 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 LHFPL6Q9Y693 200 aa0.63□□□□□ -2.31
CCDC39-206ENST00000489868 SNAPC4Q5SXM2 1469 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 RTL9Q8NET4 1388 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 CCNB3Q8WWL7 1395 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 A0A087WUJ7 227 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 A0A1B0GV90 55 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 C5orf49A4QMS7 147 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 PRORSD1PA6NEY8 169 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 FAM159BA6NKW6 160 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 CLDN24A6NM45 220 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 EVPLLA8MZ36 301 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 PPP5D1E7EU14 171 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 GPR31O00270 319 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 KPNA4O00629 521 aaPredicted RBP0.62□□□□□ -2.31
CCDC39-206ENST00000489868 PDE6DO43924 150 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 ATG12O94817 140 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 HAND1O96004 215 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 COX4I1P13073 169 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 MYL12AP19105 171 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 OGNP20774 298 aaKnown RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms