RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 GINS3Q9BRX5 216 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 C11orf68Q9H3H3 251 aaKnown RBP5.3□□□□□ -1.56
COL9A1-209ENST00000489861 TMEM231Q9H6L2 316 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 TMEM140Q9NV12 185 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 CACFD1Q9UGQ2 172 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 ANAPC10Q9UM13 185 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 LRP2P98164 4655 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 PIGBOS1A0A0B4J2F0 54 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 TMEM213A2RRL7 107 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 FAM25AB3EWG3 89 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 FAM25CB3EWG5 89 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 FAM25GB3EWG6 89 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 C11orf94C9JXX5 98 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 K7EMT4 169 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 CORTO00230 105 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 TSPAN4O14817 238 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 PGLYRP1O75594 196 aaPredicted RBP5.29□□□□□ -1.56
COL9A1-209ENST00000489861 SCAF4O95104 1147 aaKnown RBP5.29□□□□□ -1.56
COL9A1-209ENST00000489861 PMP2P02689 132 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 CLEC3BP05452 202 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 SERPINE2P07093 398 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 IL6RP08887 468 aaPredicted RBP5.29□□□□□ -1.56
COL9A1-209ENST00000489861 GNRHRP30968 328 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 GPR183P32249 361 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 UCP3P55916 312 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 OR2B8PP59922 312 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 LSM3P62310 102 aaKnown RBP5.29□□□□□ -1.56
COL9A1-209ENST00000489861 MRPS10P82664 201 aaKnown RBP5.29□□□□□ -1.56
COL9A1-209ENST00000489861 ZNF585BQ52M93 769 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 TM4SF20Q53R12 229 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 C10orf55Q5SWW7 151 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 SLC25A24Q6NUK1 477 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 ZNF818PQ6ZRF7 136 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 H2BFWTQ7Z2G1 175 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 CCDC71LQ8N9Z2 235 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 ZNF502Q8TBZ5 544 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 TMEM190Q8WZ59 177 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 NARS2Q96I59 477 aaKnown RBP5.29□□□□□ -1.56
COL9A1-209ENST00000489861 FANCD2OSQ96PS1 177 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 TXN2Q99757 166 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 FUNDC2Q9BWH2 189 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 RNF167Q9H6Y7 350 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 C21orf62Q9NYP8 219 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 COMMD3Q9UBI1 195 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 PLA2G2DQ9UNK4 145 aa5.29□□□□□ -1.56
COL9A1-209ENST00000489861 MEIS3P1A6NDR6 274 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 C15orf62A8K5M9 175 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 NOL3O60936 208 aaKnown RBP5.28□□□□□ -1.56
COL9A1-209ENST00000489861 RBMXL2O75526 392 aaKnown RBP5.28□□□□□ -1.56
COL9A1-209ENST00000489861 S1PR2O95136 353 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 RLN1P04808 185 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 C8orf88P0DMB2 117 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 ZNF182P17025 639 aaPredicted RBP5.28□□□□□ -1.56
COL9A1-209ENST00000489861 HRH1P35367 487 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 LPAR6P43657 344 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 RFX2P48378 723 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 EIF2B2P49770 351 aaKnown RBP5.28□□□□□ -1.56
COL9A1-209ENST00000489861 XGP55808 180 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 KRTAP10-2P60368 255 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 ERHP84090 104 aaKnown RBP5.28□□□□□ -1.56
COL9A1-209ENST00000489861 SSBP1Q04837 148 aaKnown RBP5.28□□□□□ -1.56
COL9A1-209ENST00000489861 Q56UQ5 140 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 TMEM41BQ5BJD5 291 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 RNASE10Q5GAN6 216 aaKnown RBP5.28□□□□□ -1.56
COL9A1-209ENST00000489861 ARRDC1Q8N5I2 433 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 SYT8Q8NBV8 401 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 OR4A16Q8NH70 328 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 ZFAND1Q8TCF1 268 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 GPX8Q8TED1 209 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 RARRES2Q99969 163 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 PDCD10Q9BUL8 212 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 RNF126Q9BV68 326 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 SCRT1Q9BWW7 348 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 ZNF436Q9C0F3 470 aaPredicted RBP5.28□□□□□ -1.56
COL9A1-209ENST00000489861 OR51B2Q9Y5P1 312 aa5.28□□□□□ -1.56
COL9A1-209ENST00000489861 F11RQ9Y624 299 aaKnown RBP5.28□□□□□ -1.56
COL9A1-209ENST00000489861 A0A1W2PS18 150 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 IGLC7A0M8Q6 106 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 KRASP01116 189 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 OR13C7P0DN81 318 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 PGAM2P15259 253 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 AREGP15514 252 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 RPL35AP18077 110 aaKnown RBP5.27□□□□□ -1.57
COL9A1-209ENST00000489861 HLA-DMAP28067 261 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 ADMP35318 185 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 SUB1P53999 127 aaKnown RBP eCLIP5.27□□□□□ -1.57
COL9A1-209ENST00000489861 MFAP4P55083 255 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 Q6ZTC4 211 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 GPR141Q7Z602 305 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 OR1P1Q8NH06 330 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 FCAMRQ8WWV6 532 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 CACNG8Q8WXS5 425 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 FRZBQ92765 325 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 BCL7BQ9BQE9 202 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 C20orf24Q9BUV8 137 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 HINT2Q9BX68 163 aa5.27□□□□□ -1.57
COL9A1-209ENST00000489861 MRPS26Q9BYN8 205 aaKnown RBP5.27□□□□□ -1.57
COL9A1-209ENST00000489861 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms