RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 H0YIG0 161 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 M0R135 149 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 RRHO14718 337 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 TLX3O43711 291 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 SYNGR1O43759 233 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 KLF7O75840 302 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 NEURL1O76050 574 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 P04436 131 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 SPINK8P0C7L1 97 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 CT45A6P0DMU7 189 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 CT45A5P0DMU8 189 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 CT45A7P0DMV0 189 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 DEFA4P12838 97 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 PVRP15151 417 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 GATA3P23771 443 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 GPR12P47775 334 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 MFAP2P55001 183 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 WFDC2Q14508 124 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 FXYD3Q14802 87 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 MSMPQ1L6U9 139 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 NRN1LQ496H8 165 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 CT45A1Q5HYN5 189 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 SPATA46Q5T0L3 261 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 GDF5OSQ5U4N7 250 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 LYSMD4Q5XG99 296 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 LINC00173Q6ZV60 143 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 ATP5L2Q7Z4Y8 100 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A1Q86YD7 464 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 PRR22Q8IZ63 422 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 CT45A3Q8NHU0 189 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 GTSF1Q8WW33 167 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 NEU4Q8WWR8 484 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 SPTSSAQ969W0 71 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 RAB37Q96AX2 223 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 ZNF799Q96GE5 643 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 ADTRPQ96IZ2 230 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 METTL7AQ9H8H3 244 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 FGF22Q9HCT0 170 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 SPANXA1Q9NS26 97 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 SERTAD4Q9NUC0 356 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 KCNS2Q9ULS6 477 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 SELENOKQ9Y6D0 94 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 KBTBD11-OT1A0A1B0GTJ5 212 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 A0A1W2PRD5 423 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 A0A1W2PRE2 83 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 A0A1W2PRF3 423 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 A0A1W2PRM7 423 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 TNFRSF13BO14836 293 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 NKX2-8O15522 239 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 DHHO43323 396 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 ZIC3O60481 467 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 WISP2O76076 250 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 CLDN14O95500 239 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 CA1P00915 261 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 IGLV2-8P01709 118 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 P0C879 139 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 ARL3P36405 182 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 FOXE3Q13461 319 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 DAZAP2Q15038 168 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 GUSBP1Q15486 140 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 PDLIM3Q53GG5 364 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 RHBDD2Q6NTF9 364 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM231DQ6ZW35 169 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 SSX8Q7RTT4 187 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 MOGAT3Q86VF5 341 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 SFTPA2Q8IWL1 248 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 SFTPA1Q8IWL2 248 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 TDHQ8IZJ6 230 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 SPEM1Q8N4L4 309 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 OR10X1Q8NGY0 326 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 ZNF502Q8TBZ5 544 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 BADQ92934 168 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 OXGR1Q96P68 337 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 CDX2Q99626 313 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 NUDT22Q9BRQ3 303 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 SPXQ9BT56 116 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 SH2D2AQ9NP31 389 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 IDI2-AS1Q9NZ38 188 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 LOXL2Q9Y4K0 774 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 HILPDAQ9Y5L2 63 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 LINC00312Q9Y6C7 94 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 THADAQ6YHU6 1953 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 KIAA1549Q9HCM3 1950 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 WDFY4Q6ZS81 3184 aa3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 NCOA6Q14686 2063 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-206ENST00000489853 TEX50A0A1B0GTY4 177 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 A0A1B0GW15 77 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 PRSS29PA6NIE9 313 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 SH2D7A6NKC9 451 aaPredicted RBP3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 C2CD4DB7Z1M9 353 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 SNAI2O43623 268 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 BRI3O95415 125 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 IGLV2-14P01704 120 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 IGKV3-11P04433 115 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 TMPRSS3P57727 454 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 ATP5G2Q06055 141 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 KLRD1Q13241 179 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 ZNF77Q15935 545 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 PSMG4Q5JS54 123 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms