RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 RAB40CQ96S21 281 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 HSPB9Q9BQS6 159 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 QTRT1Q9BXR0 403 aaKnown RBP8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 FOXA2Q9Y261 457 aaPredicted RBP8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 CFDP00746 253 aaPredicted RBP8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 MYCNOSP40205 109 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 TAS2R30P59541 319 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 ERVK-16P61578 105 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 ID3Q02535 119 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 CFHR3Q02985 330 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 ZNF266Q14584 549 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 ETV3LQ6ZN32 361 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 C8orf86Q6ZUL3 223 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 ZNF429Q86V71 674 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 MRPL41Q8IXM3 137 aaKnown RBP8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 VSTM2AQ8TAG5 236 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 AIFM2Q9BRQ8 373 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 MCRIP2Q9BUT9 160 aaKnown RBP8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 C11orf1Q9H5F2 150 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 OR5AC2Q9NZP5 309 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 FBXO7Q9Y3I1 522 aa8.24□□□□□ -1.09
SCAMP4-208ENST00000489554 IGHV7-81A0A0B4J1V7 117 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 TEX50A0A1B0GTY4 177 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 RPS10-NUDT3A0A1W2PQS6 291 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 CA2P00918 260 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 PRB2P02812 416 aaPredicted RBP8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 RPLP1P05386 114 aaKnown RBP8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 EGR2P11161 476 aaPredicted RBP8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 CDX1P47902 265 aaPredicted RBP8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 RPL8P62917 257 aaKnown RBP8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 BLOC1S1P78537 153 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 ALKAL2Q6UX46 152 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 C18orf65Q6ZTR6 163 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 OR2C3Q8N628 320 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 UBAC2Q8NBM4 344 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 DPF1Q92782 380 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 SAT2Q96F10 170 aaPredicted RBP8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 CLCC1Q96S66 551 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 P2RX4Q99571 388 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 AURKAIP1Q9NWT8 199 aaPredicted RBP8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 HSPB7Q9UBY9 170 aa8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 RCL1Q9Y2P8 373 aaKnown RBP8.23□□□□□ -1.09
SCAMP4-208ENST00000489554 TEX22C9J3V5 150 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 CCL24O00175 119 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 ATP6V0E1O15342 81 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 DFFBO76075 338 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 NXPH3O95157 252 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 TMEM50AO95807 157 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 PSMB8P28062 276 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 RAB5CP51148 216 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 CX3CL1P78423 397 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 TNFRSF9Q07011 255 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 PLGLAQ15195 96 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 C19orf54Q5BKX5 351 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 ASPHD1Q5U4P2 390 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 HSD17B13Q7Z5P4 300 aaPredicted RBP8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 COMMD7Q86VX2 200 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 STX12Q86Y82 276 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 MMD2Q8IY49 270 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 EIF4E3Q8N5X7 224 aaKnown RBP8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 OR52E5Q8NH55 327 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 MRAPQ8TCY5 172 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 C4orf3Q8WVX3 66 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 CIB3Q96Q77 187 aaPredicted RBP8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 CITED4Q96RK1 184 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 PARP11Q9NR21 331 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 NDUFA4L2Q9NRX3 87 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 PRNDQ9UKY0 176 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 ZNF257Q9Y2Q1 563 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 WSB1Q9Y6I7 421 aa8.22□□□□□ -1.09
SCAMP4-208ENST00000489554 TRAV41A0A0B4J266 112 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 ANKRD34BA5PLL1 514 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 TEX46H3BTG2 121 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 NMBP08949 121 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 SEC11BP0C7V7 166 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 PPIFP30405 207 aaKnown RBP8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 MAS1LP35410 378 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 PAX9P55771 341 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 HSPE1P61604 102 aaKnown RBP8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 RPP30P78346 268 aaKnown RBP8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 TNXAQ16473 311 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 SPINK9Q5DT21 86 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 UQCC3Q6UW78 93 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 ZNF562Q6V9R5 426 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 LCNL1Q6ZST4 164 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 OR5B3Q8NH48 314 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 OR4A16Q8NH70 328 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 SRSF12Q8WXF0 261 aaKnown RBP8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 RAX2Q96IS3 184 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 LYRM2Q9NU23 88 aaPredicted RBP8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 ZMAT5Q9UDW3 170 aaKnown RBP8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 OR51B2Q9Y5P1 312 aa8.21□□□□□ -1.1
SCAMP4-208ENST00000489554 IGLC7A0M8Q6 106 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 KRBOX1C9JBD0 128 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 INS-IGF2F8WCM5 200 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 G3V318 75 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 IGLV1-40P01703 118 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 CAV2P51636 162 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 CRIP2P52943 208 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms