RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 OR5AC1P0C628 307 aa18.75■□□□□ 0.59
HMGN1-217ENST00000489072 OR51S1Q8NGJ8 323 aa18.75■□□□□ 0.59
HMGN1-217ENST00000489072 LHFPL5Q8TAF8 219 aa18.75■□□□□ 0.59
HMGN1-217ENST00000489072 GLYATL2Q8WU03 294 aa18.75■□□□□ 0.59
HMGN1-217ENST00000489072 NAA60Q9H7X0 242 aa18.75■□□□□ 0.59
HMGN1-217ENST00000489072 IGHV3OR16-8A0A075B7F1 116 aa18.74■□□□□ 0.59
HMGN1-217ENST00000489072 B3GALNT1O75752 331 aa18.74■□□□□ 0.59
HMGN1-217ENST00000489072 MT-CO2P00403 227 aa18.74■□□□□ 0.59
HMGN1-217ENST00000489072 IGHV3-48P01763 117 aa18.74■□□□□ 0.59
HMGN1-217ENST00000489072 ERHP84090 104 aaKnown RBP18.74■□□□□ 0.59
HMGN1-217ENST00000489072 Q6ZRM9 215 aa18.74■□□□□ 0.59
HMGN1-217ENST00000489072 TEX13DA0A0J9YY54 714 aaPredicted RBP18.73■□□□□ 0.59
HMGN1-217ENST00000489072 FABP12A6NFH5 140 aa18.73■□□□□ 0.59
HMGN1-217ENST00000489072 OR11H12B2RN74 326 aa18.73■□□□□ 0.59
HMGN1-217ENST00000489072 INS-IGF2F8WCM5 200 aa18.73■□□□□ 0.59
HMGN1-217ENST00000489072 CDS2O95674 445 aa18.73■□□□□ 0.59
HMGN1-217ENST00000489072 SLC35G3Q8N808 338 aa18.73■□□□□ 0.59
HMGN1-217ENST00000489072 RRNAD1Q96FB5 475 aaKnown RBP18.73■□□□□ 0.59
HMGN1-217ENST00000489072 PRRT1Q99946 306 aa18.73■□□□□ 0.59
HMGN1-217ENST00000489072 SRD5A3Q9H8P0 318 aa18.73■□□□□ 0.59
HMGN1-217ENST00000489072 DAZ1Q9NQZ3 744 aaKnown RBP18.73■□□□□ 0.59
HMGN1-217ENST00000489072 RBMY1BA6NDE4 496 aaKnown RBP18.72■□□□□ 0.59
HMGN1-217ENST00000489072 RBMY1EA6NEQ0 496 aaKnown RBP18.72■□□□□ 0.59
HMGN1-217ENST00000489072 CRYM-AS1A6NIL9 109 aa18.72■□□□□ 0.59
HMGN1-217ENST00000489072 IFNA17P01571 189 aa18.72■□□□□ 0.59
HMGN1-217ENST00000489072 RBMY1DP0C7P1 496 aaKnown RBP18.72■□□□□ 0.59
HMGN1-217ENST00000489072 FCGR2BP31994 310 aaPredicted RBP18.72■□□□□ 0.59
HMGN1-217ENST00000489072 ETV6P41212 452 aa18.72■□□□□ 0.59
HMGN1-217ENST00000489072 MFAP4P55083 255 aa18.72■□□□□ 0.59
HMGN1-217ENST00000489072 PINX1Q96BK5 328 aaKnown RBP18.72■□□□□ 0.59
HMGN1-217ENST00000489072 SPATA25Q9BR10 227 aa18.72■□□□□ 0.59
HMGN1-217ENST00000489072 C20orf24Q9BUV8 137 aa18.72■□□□□ 0.59
HMGN1-217ENST00000489072 TRAV25A0A0B4J276 109 aa18.71■□□□□ 0.59
HMGN1-217ENST00000489072 ZNF207O43670 478 aaKnown RBP18.71■□□□□ 0.59
HMGN1-217ENST00000489072 SELENOHQ8IZQ5 122 aaKnown RBP18.71■□□□□ 0.59
HMGN1-217ENST00000489072 OR52B4Q8NGK2 314 aa18.71■□□□□ 0.59
HMGN1-217ENST00000489072 RNASE11Q8TAA1 199 aaKnown RBP18.71■□□□□ 0.59
HMGN1-217ENST00000489072 CITED4Q96RK1 184 aa18.71■□□□□ 0.59
HMGN1-217ENST00000489072 TXN2Q99757 166 aa18.71■□□□□ 0.59
HMGN1-217ENST00000489072 GAR1Q9NY12 217 aaKnown RBP18.71■□□□□ 0.59
HMGN1-217ENST00000489072 C3orf84H3BNL1 204 aa18.7■□□□□ 0.58
HMGN1-217ENST00000489072 RNASE2P10153 161 aaKnown RBP18.7■□□□□ 0.58
HMGN1-217ENST00000489072 PVRIGQ6DKI7 326 aa18.7■□□□□ 0.58
HMGN1-217ENST00000489072 RBPMS2Q6ZRY4 209 aaKnown RBP18.7■□□□□ 0.58
HMGN1-217ENST00000489072 SLC16A13Q7RTY0 426 aa18.7■□□□□ 0.58
HMGN1-217ENST00000489072 MUC7Q8TAX7 377 aa18.7■□□□□ 0.58
HMGN1-217ENST00000489072 RBPMSQ93062 196 aaKnown RBP18.7■□□□□ 0.58
HMGN1-217ENST00000489072 TMEM230Q96A57 120 aa18.7■□□□□ 0.58
HMGN1-217ENST00000489072 PDCD10Q9BUL8 212 aa18.7■□□□□ 0.58
HMGN1-217ENST00000489072 RBM38Q9H0Z9 239 aaKnown RBP18.7■□□□□ 0.58
HMGN1-217ENST00000489072 RETNQ9HD89 108 aa18.7■□□□□ 0.58
HMGN1-217ENST00000489072 RYR3Q15413 4870 aa18.69■□□□□ 0.58
HMGN1-217ENST00000489072 CCDC160A6NGH7 325 aa18.69■□□□□ 0.58
HMGN1-217ENST00000489072 K7EMT4 169 aa18.69■□□□□ 0.58
HMGN1-217ENST00000489072 NUPL2O15504 423 aaKnown RBP18.69■□□□□ 0.58
HMGN1-217ENST00000489072 SNCAP37840 140 aa18.69■□□□□ 0.58
HMGN1-217ENST00000489072 HOXA1P49639 335 aaPredicted RBP18.69■□□□□ 0.58
HMGN1-217ENST00000489072 DHODHQ02127 395 aa18.69■□□□□ 0.58
HMGN1-217ENST00000489072 AARDQ4LEZ3 155 aa18.69■□□□□ 0.58
HMGN1-217ENST00000489072 FAM219AQ8IW50 185 aa18.69■□□□□ 0.58
HMGN1-217ENST00000489072 RELQ04864 619 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-217ENST00000489072 HIPK2Q9H2X6 1198 aa18.68■□□□□ 0.58
HMGN1-217ENST00000489072 EDA2RQ9HAV5 297 aa18.68■□□□□ 0.58
HMGN1-217ENST00000489072 MCUBQ9NWR8 336 aa18.68■□□□□ 0.58
HMGN1-217ENST00000489072 SCP2D1Q9UJQ7 156 aa18.68■□□□□ 0.58
HMGN1-217ENST00000489072 V9GYH0 126 aa18.68■□□□□ 0.58
HMGN1-217ENST00000489072 C15orf62A8K5M9 175 aa18.67■□□□□ 0.58
HMGN1-217ENST00000489072 ANKRD55Q3KP44 614 aa18.67■□□□□ 0.58
HMGN1-217ENST00000489072 TMEM268Q5VZI3 342 aa18.67■□□□□ 0.58
HMGN1-217ENST00000489072 TRIM63Q969Q1 353 aa18.67■□□□□ 0.58
HMGN1-217ENST00000489072 GPR146Q96CH1 333 aa18.67■□□□□ 0.58
HMGN1-217ENST00000489072 PRR13Q9NZ81 148 aa18.67■□□□□ 0.58
HMGN1-217ENST00000489072 CSMD3Q7Z407 3707 aa18.66■□□□□ 0.58
HMGN1-217ENST00000489072 TSPAN4O14817 238 aa18.66■□□□□ 0.58
HMGN1-217ENST00000489072 GNG7O60262 68 aa18.66■□□□□ 0.58
HMGN1-217ENST00000489072 KLF9Q13886 244 aaPredicted RBP18.66■□□□□ 0.58
HMGN1-217ENST00000489072 OR10C1Q96KK4 312 aa18.66■□□□□ 0.58
HMGN1-217ENST00000489072 ENY2Q9NPA8 101 aa18.66■□□□□ 0.58
HMGN1-217ENST00000489072 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.66■□□□□ 0.58
HMGN1-217ENST00000489072 CACNG5Q9UF02 275 aa18.66■□□□□ 0.58
HMGN1-217ENST00000489072 TMEM56-RWDD3S4R434 201 aa18.66■□□□□ 0.58
HMGN1-217ENST00000489072 SPCS3P61009 180 aa18.65■□□□□ 0.58
HMGN1-217ENST00000489072 TMEM187Q14656 261 aa18.65■□□□□ 0.58
HMGN1-217ENST00000489072 BSXQ3C1V8 233 aa18.65■□□□□ 0.58
HMGN1-217ENST00000489072 PYDC2Q56P42 97 aa18.65■□□□□ 0.58
HMGN1-217ENST00000489072 OR52E5Q8NH55 327 aa18.65■□□□□ 0.58
HMGN1-217ENST00000489072 GALNT14Q96FL9 552 aa18.65■□□□□ 0.58
HMGN1-217ENST00000489072 SPAG8Q99932 426 aaPredicted RBP18.65■□□□□ 0.58
HMGN1-217ENST00000489072 SMPXQ9UHP9 88 aa18.65■□□□□ 0.58
HMGN1-217ENST00000489072 YIF1AO95070 293 aa18.64■□□□□ 0.57
HMGN1-217ENST00000489072 SUB1P53999 127 aaKnown RBP eCLIP18.64■□□□□ 0.57
HMGN1-217ENST00000489072 ZNF79Q15937 498 aa18.64■□□□□ 0.57
HMGN1-217ENST00000489072 DUSP18Q8NEJ0 188 aa18.64■□□□□ 0.57
HMGN1-217ENST00000489072 FAM110AQ9BQ89 295 aa18.64■□□□□ 0.57
HMGN1-217ENST00000489072 FNDC4Q9H6D8 234 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-217ENST00000489072 MRPL36Q9P0J6 103 aaKnown RBP18.64■□□□□ 0.57
HMGN1-217ENST00000489072 IGHV3-49A0A0A0MS15 119 aa18.63■□□□□ 0.57
HMGN1-217ENST00000489072 IGHV7-4-1A0A0J9YVY3 117 aa18.63■□□□□ 0.57
HMGN1-217ENST00000489072 NPBWR1P48145 328 aa18.63■□□□□ 0.57
HMGN1-217ENST00000489072 SUPT4H1P63272 117 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms