RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 LOC102724200A0A096LPH7 203 aaPredicted RBP17.15■□□□□ 0.34
COL9A3-213ENST00000489045 A0A0B4J293 547 aa17.15■□□□□ 0.34
COL9A3-213ENST00000489045 C15orf62A8K5M9 175 aa17.15■□□□□ 0.34
COL9A3-213ENST00000489045 ATG12O94817 140 aa17.15■□□□□ 0.34
COL9A3-213ENST00000489045 MRPS10P82664 201 aaKnown RBP17.15■□□□□ 0.34
COL9A3-213ENST00000489045 SSBP1Q04837 148 aaKnown RBP17.15■□□□□ 0.34
COL9A3-213ENST00000489045 RELQ04864 619 aaPredicted RBP17.15■□□□□ 0.34
COL9A3-213ENST00000489045 SP6Q3SY56 376 aa17.15■□□□□ 0.34
COL9A3-213ENST00000489045 LAMTOR1Q6IAA8 161 aa17.15■□□□□ 0.34
COL9A3-213ENST00000489045 FAAP20Q6NZ36 180 aa17.15■□□□□ 0.34
COL9A3-213ENST00000489045 SLC35G3Q8N808 338 aa17.15■□□□□ 0.34
COL9A3-213ENST00000489045 TXN2Q99757 166 aa17.15■□□□□ 0.34
COL9A3-213ENST00000489045 UBQLN2Q9UHD9 624 aa17.15■□□□□ 0.34
COL9A3-213ENST00000489045 ST8SIA3O43173 380 aa17.14■□□□□ 0.33
COL9A3-213ENST00000489045 SMIM4Q8WVI0 70 aa17.14■□□□□ 0.33
COL9A3-213ENST00000489045 IFNA17P01571 189 aa17.13■□□□□ 0.33
COL9A3-213ENST00000489045 CTSDP07339 412 aaPredicted RBP17.13■□□□□ 0.33
COL9A3-213ENST00000489045 UCP1P25874 307 aa17.13■□□□□ 0.33
COL9A3-213ENST00000489045 MEF2DQ14814 521 aa17.13■□□□□ 0.33
COL9A3-213ENST00000489045 RAB2BQ8WUD1 216 aa17.13■□□□□ 0.33
COL9A3-213ENST00000489045 LYSTQ99698 3801 aa17.13■□□□□ 0.33
COL9A3-213ENST00000489045 PDCD10Q9BUL8 212 aa17.13■□□□□ 0.33
COL9A3-213ENST00000489045 NXF2Q9GZY0 626 aaKnown RBP17.13■□□□□ 0.33
COL9A3-213ENST00000489045 SMPXQ9UHP9 88 aa17.13■□□□□ 0.33
COL9A3-213ENST00000489045 RYR2Q92736 4967 aa17.13■□□□□ 0.33
COL9A3-213ENST00000489045 SACSQ9NZJ4 4579 aa17.13■□□□□ 0.33
COL9A3-213ENST00000489045 A0A0G2JRQ6 117 aa17.12■□□□□ 0.33
COL9A3-213ENST00000489045 LCE6AA0A183 80 aa17.12■□□□□ 0.33
COL9A3-213ENST00000489045 GNG7O60262 68 aa17.12■□□□□ 0.33
COL9A3-213ENST00000489045 YIF1AO95070 293 aa17.12■□□□□ 0.33
COL9A3-213ENST00000489045 SNCAP37840 140 aa17.12■□□□□ 0.33
COL9A3-213ENST00000489045 IL18Q14116 193 aa17.12■□□□□ 0.33
COL9A3-213ENST00000489045 DYNC2LI1Q8TCX1 351 aa17.12■□□□□ 0.33
COL9A3-213ENST00000489045 OR10C1Q96KK4 312 aa17.12■□□□□ 0.33
COL9A3-213ENST00000489045 CCDC59Q9P031 241 aaKnown RBP17.12■□□□□ 0.33
COL9A3-213ENST00000489045 IGHV7-4-1A0A0J9YVY3 117 aa17.11■□□□□ 0.33
COL9A3-213ENST00000489045 OR4C46A6NHA9 309 aa17.11■□□□□ 0.33
COL9A3-213ENST00000489045 INS-IGF2F8WCM5 200 aa17.11■□□□□ 0.33
COL9A3-213ENST00000489045 HOXA1P49639 335 aaPredicted RBP17.11■□□□□ 0.33
COL9A3-213ENST00000489045 ODF3L2Q3SX64 289 aa17.11■□□□□ 0.33
COL9A3-213ENST00000489045 RNASE11Q8TAA1 199 aaKnown RBP17.11■□□□□ 0.33
COL9A3-213ENST00000489045 RRNAD1Q96FB5 475 aaKnown RBP17.11■□□□□ 0.33
COL9A3-213ENST00000489045 DIRAS2Q96HU8 199 aa17.11■□□□□ 0.33
COL9A3-213ENST00000489045 C14orf166Q9Y224 244 aaKnown RBP17.11■□□□□ 0.33
COL9A3-213ENST00000489045 IGHV3-49A0A0A0MS15 119 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 DISC1C4P0D8 188 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 CHEK1O14757 476 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 CTDSPLO15194 276 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 B3GALNT1O75752 331 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 OR5AC1P0C628 307 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 TMBIM6P55061 237 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 TMEM116Q8NCL8 245 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 OR4C16Q8NGL9 310 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 RNF2Q99496 336 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 BCL7BQ9BQE9 202 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 OVOL2Q9BRP0 275 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 RHPN1-AS1Q9BWJ2 59 aa17.1■□□□□ 0.33
COL9A3-213ENST00000489045 AKAIN1P0CW23 69 aa17.09■□□□□ 0.33
COL9A3-213ENST00000489045 RNASE2P10153 161 aaKnown RBP17.09■□□□□ 0.33
COL9A3-213ENST00000489045 ETV6P41212 452 aa17.09■□□□□ 0.33
COL9A3-213ENST00000489045 DUSP18Q8NEJ0 188 aa17.09■□□□□ 0.33
COL9A3-213ENST00000489045 IL17DQ8TAD2 202 aa17.09■□□□□ 0.33
COL9A3-213ENST00000489045 RTBDNQ9BSG5 229 aaPredicted RBP17.09■□□□□ 0.33
COL9A3-213ENST00000489045 TMEM222Q9H0R3 208 aa17.09■□□□□ 0.33
COL9A3-213ENST00000489045 TEX13DA0A0J9YY54 714 aaPredicted RBP17.08■□□□□ 0.32
COL9A3-213ENST00000489045 NPBWR1P48145 328 aa17.08■□□□□ 0.32
COL9A3-213ENST00000489045 SURF2Q15527 256 aaPredicted RBP17.08■□□□□ 0.32
COL9A3-213ENST00000489045 PVRIGQ6DKI7 326 aa17.08■□□□□ 0.32
COL9A3-213ENST00000489045 LHFPL5Q8TAF8 219 aa17.08■□□□□ 0.32
COL9A3-213ENST00000489045 C6orf62Q9GZU0 229 aaPredicted RBP17.08■□□□□ 0.32
COL9A3-213ENST00000489045 NAA60Q9H7X0 242 aa17.08■□□□□ 0.32
COL9A3-213ENST00000489045 ENY2Q9NPA8 101 aa17.08■□□□□ 0.32
COL9A3-213ENST00000489045 RABL2AQ9UBK7 228 aaPredicted RBP17.08■□□□□ 0.32
COL9A3-213ENST00000489045 RABL2BQ9UNT1 228 aa17.08■□□□□ 0.32
COL9A3-213ENST00000489045 TRAV14DV4A0A0A6YYC5 116 aa17.07■□□□□ 0.32
COL9A3-213ENST00000489045 CDS2O95674 445 aa17.07■□□□□ 0.32
COL9A3-213ENST00000489045 SUB1P53999 127 aaKnown RBP eCLIP17.07■□□□□ 0.32
COL9A3-213ENST00000489045 APOC4P55056 127 aa17.07■□□□□ 0.32
COL9A3-213ENST00000489045 Q6ZRM9 215 aa17.07■□□□□ 0.32
COL9A3-213ENST00000489045 GLYATL2Q8WU03 294 aa17.07■□□□□ 0.32
COL9A3-213ENST00000489045 IGHV3OR16-13A0A075B7E8 117 aa17.06■□□□□ 0.32
COL9A3-213ENST00000489045 IGHV3-74A0A0B4J1X5 117 aa17.06■□□□□ 0.32
COL9A3-213ENST00000489045 CORTO00230 105 aa17.06■□□□□ 0.32
COL9A3-213ENST00000489045 TOMM20LQ6UXN7 152 aa17.06■□□□□ 0.32
COL9A3-213ENST00000489045 FAM219AQ8IW50 185 aa17.06■□□□□ 0.32
COL9A3-213ENST00000489045 RBPMSQ93062 196 aaKnown RBP17.06■□□□□ 0.32
COL9A3-213ENST00000489045 GINS3Q9BRX5 216 aa17.06■□□□□ 0.32
COL9A3-213ENST00000489045 GPR132Q9UNW8 380 aa17.06■□□□□ 0.32
COL9A3-213ENST00000489045 IGKV3-7A0A075B6H7 116 aa17.05■□□□□ 0.32
COL9A3-213ENST00000489045 NOL3O60936 208 aaKnown RBP17.05■□□□□ 0.32
COL9A3-213ENST00000489045 ZNF600Q6ZNG1 722 aa17.05■□□□□ 0.32
COL9A3-213ENST00000489045 SELENOHQ8IZQ5 122 aaKnown RBP17.05■□□□□ 0.32
COL9A3-213ENST00000489045 OR51S1Q8NGJ8 323 aa17.05■□□□□ 0.32
COL9A3-213ENST00000489045 PRRT1Q99946 306 aa17.05■□□□□ 0.32
COL9A3-213ENST00000489045 PUS1Q9Y606 427 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL9A3-213ENST00000489045 ANKRD20A5PA0PJZ0 165 aa17.04■□□□□ 0.32
COL9A3-213ENST00000489045 CRYM-AS1A6NIL9 109 aa17.04■□□□□ 0.32
COL9A3-213ENST00000489045 H3BMQ9 156 aa17.04■□□□□ 0.32
COL9A3-213ENST00000489045 GSTZ1O43708 216 aaPredicted RBP17.04■□□□□ 0.32
COL9A3-213ENST00000489045 TMEM50AO95807 157 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms