RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 ZNF414Q96IQ9 312 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 GPHA2Q96T91 129 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 RNF167Q9H6Y7 350 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 VSIRQ9H7M9 311 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 PRNDQ9UKY0 176 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 X6R8D5 127 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 HSPG2P98160 4391 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 RGS10O43665 173 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 MT-CO2P00403 227 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 CD74P04233 296 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 SPART-AS1P0CW21 52 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 NPPCP23582 126 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 F2RP25116 425 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 FXYD4P59646 89 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 ERHP84090 104 aaKnown RBP4.69□□□□□ -1.66
PTCH1-211ENST00000488809 C12orf74Q32Q52 190 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 UBE2UQ5VVX9 321 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 TOMM20LQ6UXN7 152 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 TMEM17Q86X19 198 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 CMTM1Q8IZ96 169 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 STXBP6Q8NFX7 210 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 MOB3AQ96BX8 217 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 METTL26Q96S19 204 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 MGLLQ99685 303 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 KRTAP4-5Q9BYR2 181 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 DAPK2Q9UIK4 370 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 ELF5Q9UKW6 265 aaPredicted RBP4.69□□□□□ -1.66
PTCH1-211ENST00000488809 CELA1Q9UNI1 258 aa4.69□□□□□ -1.66
PTCH1-211ENST00000488809 I3L2K1 104 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 CORTO00230 105 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 KRASP01116 189 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 ZNF688P0C7X2 276 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 C4BPBP20851 252 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 S100GP29377 79 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 FGF9P31371 208 aaPredicted RBP4.68□□□□□ -1.66
PTCH1-211ENST00000488809 CBX5P45973 191 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 AP2S1P53680 142 aaPredicted RBP4.68□□□□□ -1.66
PTCH1-211ENST00000488809 FAM3BP58499 235 aaPredicted RBP4.68□□□□□ -1.66
PTCH1-211ENST00000488809 ACTL10Q5JWF8 245 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 Q6ZR54 194 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 ZNF818PQ6ZRF7 136 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 ZNF767PQ75MW2 155 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 ZNF114Q8NC26 417 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 OR4A16Q8NH70 328 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 PINX1Q96BK5 328 aaKnown RBP4.68□□□□□ -1.66
PTCH1-211ENST00000488809 CLEC5AQ9NY25 188 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 TMED3Q9Y3Q3 217 aa4.68□□□□□ -1.66
PTCH1-211ENST00000488809 PUS1Q9Y606 427 aaKnown RBP eCLIP4.68□□□□□ -1.66
PTCH1-211ENST00000488809 IGHV3-66A0A0C4DH42 116 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 TRDV1A0A1B0GX56 115 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 HELTA6NFD8 242 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 SMIM9A6NGZ8 99 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 KNCNA6PVL3 124 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 NOTOA8MTQ0 251 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 K7EQG2 157 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 RLN1P04808 185 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 GIG44P09565 113 aaPredicted RBP4.67□□□□□ -1.66
PTCH1-211ENST00000488809 G6PCP35575 357 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 LPAR6P43657 344 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 P2RY1P47900 373 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 SNRPD3P62318 126 aaKnown RBP4.67□□□□□ -1.66
PTCH1-211ENST00000488809 ZNF367Q7RTV3 350 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 PRSS48Q7RTY5 328 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 HOGA1Q86XE5 327 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 Q8N1X5 172 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 FAM24BQ8N5W8 94 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 C15orf53Q8NAA6 179 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 CSNK1G2-AS1Q8NCQ2 148 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 OR5AP2Q8NGF4 316 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 NEU1Q99519 415 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 ATG101Q9BSB4 218 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 ZFAND3Q9H8U3 227 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 RHBDL2Q9NX52 303 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 NSG2Q9Y328 171 aa4.67□□□□□ -1.66
PTCH1-211ENST00000488809 A0A0A6YYH2 397 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 A6NJ64 397 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 SSX5O60225 188 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 PGLYRP1O75594 196 aaPredicted RBP4.66□□□□□ -1.66
PTCH1-211ENST00000488809 IGHV3-48P01763 117 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 APOHP02749 345 aaPredicted RBP4.66□□□□□ -1.66
PTCH1-211ENST00000488809 GNRHRP30968 328 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 SNCAP37840 140 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 HOXA1P49639 335 aaPredicted RBP4.66□□□□□ -1.66
PTCH1-211ENST00000488809 SUB1P53999 127 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTCH1-211ENST00000488809 SCAND1P57086 179 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 PRCDQ00LT1 54 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 DHRS2Q13268 280 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 TBCEQ15813 527 aaPredicted RBP4.66□□□□□ -1.66
PTCH1-211ENST00000488809 PSMG4Q5JS54 123 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 OGFRL1Q5TC84 451 aaPredicted RBP4.66□□□□□ -1.66
PTCH1-211ENST00000488809 C22orf42Q6IC83 251 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 H2BFWTQ7Z2G1 175 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 LILRB2Q8N423 598 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 LGALS14Q8TCE9 139 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 FCAMRQ8WWV6 532 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 TMEM230Q96A57 120 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 NIPSNAP3BQ9BS92 247 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 PDCD10Q9BUL8 212 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 DUSP21Q9H596 190 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 SEPSECSQ9HD40 501 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms