RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SLC25A24Q6NUK1 477 aa14.26□□□□□ -0.13
PTCD3-217ENST00000488801 S4R3C0 116 aa14.26□□□□□ -0.13
PTCD3-217ENST00000488801 IGHV3-23P01764 117 aa14.25□□□□□ -0.13
PTCD3-217ENST00000488801 RPEL1Q2QD12 228 aa14.25□□□□□ -0.13
PTCD3-217ENST00000488801 CLEC19AQ6UXS0 136 aa14.25□□□□□ -0.13
PTCD3-217ENST00000488801 IL34Q6ZMJ4 242 aa14.25□□□□□ -0.13
PTCD3-217ENST00000488801 SCARB1Q8WTV0 552 aa14.25□□□□□ -0.13
PTCD3-217ENST00000488801 MITD1Q8WV92 249 aa14.25□□□□□ -0.13
PTCD3-217ENST00000488801 ZNF414Q96IQ9 312 aa14.25□□□□□ -0.13
PTCD3-217ENST00000488801 GGCTO75223 188 aaKnown RBP14.24□□□□□ -0.13
PTCD3-217ENST00000488801 INSL3P51460 131 aa14.24□□□□□ -0.13
PTCD3-217ENST00000488801 KRTAP10-11P60412 298 aa14.24□□□□□ -0.13
PTCD3-217ENST00000488801 GGNBP1Q5YKI7 109 aa14.24□□□□□ -0.13
PTCD3-217ENST00000488801 MZT2BQ6NZ67 158 aa14.24□□□□□ -0.13
PTCD3-217ENST00000488801 TMEM170AQ8WVE7 144 aa14.24□□□□□ -0.13
PTCD3-217ENST00000488801 TRAV6A0A075B6T7 132 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 FAM240BA0A1B0GVZ2 78 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 FAM90A26D6RGX4 464 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 ARL3P36405 182 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 SYNJ2BPP57105 145 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 DEFA6Q01524 100 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 C4orf46Q504U0 113 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 C11orf87Q6NUJ2 197 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 REC114Q7Z4M0 266 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 DUSP18Q8NEJ0 188 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 OR52B4Q8NGK2 314 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 OR9G4Q8NGQ1 327 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 C21orf62Q9NYP8 219 aa14.23□□□□□ -0.13
PTCD3-217ENST00000488801 A8MWP6 167 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 LGALS9O00182 355 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 TGOLN2O43493 480 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 ADAP1O75689 374 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 CLEC3BP05452 202 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 HOXB5P09067 269 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 GPR183P32249 361 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 C2orf83Q53S99 150 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 GPHB5Q86YW7 130 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 COQ8AQ8NI60 647 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 BSCL2Q96G97 398 aaPredicted RBP14.22□□□□□ -0.13
PTCD3-217ENST00000488801 ENY2Q9NPA8 101 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 SIGLEC8Q9NYZ4 499 aa14.22□□□□□ -0.13
PTCD3-217ENST00000488801 MPTX1A8MV57 137 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 CORTO00230 105 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 NXPH3O95157 252 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 MT-CO2P00403 227 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 H2AFB2P0C5Z0 115 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 ADMP35318 185 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 SNCAP37840 140 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 HTR2BP41595 481 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 SLC24A4Q8NFF2 622 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 OR1S1Q8NH92 325 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 MISP3Q96FF7 219 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 ZNF436Q9C0F3 470 aaPredicted RBP14.21□□□□□ -0.13
PTCD3-217ENST00000488801 RBKSQ9H477 322 aa14.21□□□□□ -0.13
PTCD3-217ENST00000488801 FNDC4Q9H6D8 234 aaPredicted RBP14.21□□□□□ -0.13
PTCD3-217ENST00000488801 AURKAIP1Q9NWT8 199 aaPredicted RBP14.21□□□□□ -0.13
PTCD3-217ENST00000488801 IGHV3-21A0A0B4J1V1 117 aa14.2□□□□□ -0.14
PTCD3-217ENST00000488801 CEBPZOSA8MTT3 80 aa14.2□□□□□ -0.14
PTCD3-217ENST00000488801 CSN3P07498 182 aa14.2□□□□□ -0.14
PTCD3-217ENST00000488801 SUB1P53999 127 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTCD3-217ENST00000488801 SPSB3Q6PJ21 355 aa14.2□□□□□ -0.14
PTCD3-217ENST00000488801 NRARPQ7Z6K4 114 aa14.2□□□□□ -0.14
PTCD3-217ENST00000488801 DTD1Q8TEA8 209 aa14.2□□□□□ -0.14
PTCD3-217ENST00000488801 TXN2Q99757 166 aa14.2□□□□□ -0.14
PTCD3-217ENST00000488801 CHRDL1Q9BU40 450 aa14.2□□□□□ -0.14
PTCD3-217ENST00000488801 SAP30O75446 220 aa14.19□□□□□ -0.14
PTCD3-217ENST00000488801 OR2C1O95371 312 aa14.19□□□□□ -0.14
PTCD3-217ENST00000488801 IGLV1-51P01701 117 aa14.19□□□□□ -0.14
PTCD3-217ENST00000488801 IL5P05113 134 aa14.19□□□□□ -0.14
PTCD3-217ENST00000488801 CTSGP08311 255 aa14.19□□□□□ -0.14
PTCD3-217ENST00000488801 ADAMTSL5Q6ZMM2 481 aa14.19□□□□□ -0.14
PTCD3-217ENST00000488801 OR4D5Q8NGN0 318 aa14.19□□□□□ -0.14
PTCD3-217ENST00000488801 ENKURQ8TC29 256 aa14.19□□□□□ -0.14
PTCD3-217ENST00000488801 ZNF431Q8TF32 576 aaPredicted RBP14.19□□□□□ -0.14
PTCD3-217ENST00000488801 SEC22CQ9BRL7 303 aa14.19□□□□□ -0.14
PTCD3-217ENST00000488801 HEYLQ9NQ87 328 aaPredicted RBP14.19□□□□□ -0.14
PTCD3-217ENST00000488801 OR2T8A6NH00 312 aa14.18□□□□□ -0.14
PTCD3-217ENST00000488801 NPY1RP25929 384 aa14.18□□□□□ -0.14
PTCD3-217ENST00000488801 TMEM190Q8WZ59 177 aa14.18□□□□□ -0.14
PTCD3-217ENST00000488801 ELOVL1Q9BW60 279 aa14.18□□□□□ -0.14
PTCD3-217ENST00000488801 GAR1Q9NY12 217 aaKnown RBP14.18□□□□□ -0.14
PTCD3-217ENST00000488801 MRPL36Q9P0J6 103 aaKnown RBP14.18□□□□□ -0.14
PTCD3-217ENST00000488801 PEMTQ9UBM1 199 aa14.18□□□□□ -0.14
PTCD3-217ENST00000488801 U3KQ87 197 aa14.18□□□□□ -0.14
PTCD3-217ENST00000488801 TMEM213A2RRL7 107 aa14.17□□□□□ -0.14
PTCD3-217ENST00000488801 PRB2P02812 416 aaPredicted RBP14.17□□□□□ -0.14
PTCD3-217ENST00000488801 MFAP4P55083 255 aa14.17□□□□□ -0.14
PTCD3-217ENST00000488801 ID3Q02535 119 aa14.17□□□□□ -0.14
PTCD3-217ENST00000488801 TATDN3Q17R31 274 aa14.17□□□□□ -0.14
PTCD3-217ENST00000488801 PLET1Q6UQ28 207 aa14.17□□□□□ -0.14
PTCD3-217ENST00000488801 UNQ9165/PRO28630Q6UXU0 137 aa14.17□□□□□ -0.14
PTCD3-217ENST00000488801 RNASEH2CQ8TDP1 164 aaKnown RBP14.17□□□□□ -0.14
PTCD3-217ENST00000488801 PINX1Q96BK5 328 aaKnown RBP14.17□□□□□ -0.14
PTCD3-217ENST00000488801 OR10C1Q96KK4 312 aa14.17□□□□□ -0.14
PTCD3-217ENST00000488801 MARVELD1Q9BSK0 173 aa14.17□□□□□ -0.14
PTCD3-217ENST00000488801 HIPK2Q9H2X6 1198 aa14.17□□□□□ -0.14
PTCD3-217ENST00000488801 C2orf70A6NJV1 201 aa14.16□□□□□ -0.14
PTCD3-217ENST00000488801 ATP5IP56385 69 aaPredicted RBP14.16□□□□□ -0.14
PTCD3-217ENST00000488801 DEFA1P59665 94 aa14.16□□□□□ -0.14
PTCD3-217ENST00000488801 DEFA3P59666 94 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms