RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 AP2S1P53680 142 aaPredicted RBP8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 EXOSC2Q13868 293 aaKnown RBP8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 ETFRF1Q6IPR1 90 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 ETV3LQ6ZN32 361 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 STPG2Q8N412 459 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 OR1S2Q8NGQ3 325 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 OR2T6Q8NHC8 308 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 FAM110DQ8TAY7 271 aaPredicted RBP8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 OR4C12Q96R67 309 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 P2RX4Q99571 388 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 HSPB11Q9Y547 144 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 RPS10-NUDT3A0A1W2PQS6 291 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 KANTRA0A1W2PQU2 76 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 IGSF23A1L1A6 192 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 H3BUA1 57 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 DFFBO76075 338 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 CST7O76096 145 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 REG1AP05451 166 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 APELAP0DMC3 54 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 ATP6V1FQ16864 119 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 OR8G2PQ6IF36 304 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 LILRB2Q8N423 598 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 KCNRGQ8N5I3 272 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 CACNG8Q8WXS5 425 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 GGACTQ9BVM4 153 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 WNT10AQ9GZT5 417 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 ARL6Q9H0F7 186 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 ZNF702PQ9H963 129 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 FBXO7Q9Y3I1 522 aa8.32□□□□□ -1.08
HLA-DMB-261ENST00000487996 SLC35B1P78383 322 aa8.31□□□□□ -1.08
HLA-DMB-261ENST00000487996 ZNF266Q14584 549 aa8.31□□□□□ -1.08
HLA-DMB-261ENST00000487996 ASPHD1Q5U4P2 390 aa8.31□□□□□ -1.08
HLA-DMB-261ENST00000487996 SLC25A24Q6NUK1 477 aa8.31□□□□□ -1.08
HLA-DMB-261ENST00000487996 C9orf62Q8N4C0 152 aa8.31□□□□□ -1.08
HLA-DMB-261ENST00000487996 TMEM217Q8N7C4 229 aa8.31□□□□□ -1.08
HLA-DMB-261ENST00000487996 LINC01548A6NM66 108 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 FNDC10F2Z333 226 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 BRI3O95415 125 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 CXCL2P19875 107 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 GPX4P36969 197 aaPredicted RBP8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 OPRK1P41145 380 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 NKX2-5P52952 324 aaPredicted RBP8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 EIF5AP63241 154 aaKnown RBP8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 DLK1P80370 383 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 NHLH2Q02577 135 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 SLC38A11Q08AI6 406 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 LGALSLQ3ZCW2 172 aaPredicted RBP8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 C19orf54Q5BKX5 351 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 PVRIGQ6DKI7 326 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 TMUB2Q71RG4 321 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 OR5C1Q8NGR4 320 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 MISP3Q96FF7 219 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 ZNF355PQ9NSJ1 428 aa8.3□□□□□ -1.08
HLA-DMB-261ENST00000487996 BORCS7-ASMTA0A0B4J1R7 106 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 TMEM89A2RUT3 159 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 G3V318 75 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 BCL2L11O43521 198 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 JTBO76095 146 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 OR5T1Q8NG75 326 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 TMEM170AQ8WVE7 144 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 ATP5SQ99766 215 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 TMEM147Q9BVK8 224 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 SLA2Q9H6Q3 261 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 FBXL17Q9UF56 701 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 IGLV11-55A0A075B6I3 123 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 PMS2P5A8MQ11 134 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 SCGB2A1O75556 95 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 NDUFA7O95182 113 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 IFNA5P01569 189 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 PPIFP30405 207 aaKnown RBP8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 CD69Q07108 199 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 CLINT1Q14677 625 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 KLK9Q2XQG4 91 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 Q6ZS46 218 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 Q6ZSV7 163 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 COMMD1Q8N668 190 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 NECAP1Q8NC96 275 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 SLC35E1Q96K37 410 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 NOL4LQ96MY1 436 aaPredicted RBP8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 C16orf95Q9H693 158 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 UQCC1Q9NVA1 299 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 KLK9Q9UKQ9 250 aa8.29□□□□□ -1.08
HLA-DMB-261ENST00000487996 PSMB11A5LHX3 300 aa8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 FAM223BA6NKX1 122 aa8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 PRSS46E5RG02 174 aa8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 LAMTOR1Q6IAA8 161 aa8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 TEX38Q6PEX7 206 aa8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 SLC16A13Q7RTY0 426 aa8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 FAM223AQ8IWN6 122 aa8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 OR4F5Q8NH21 305 aa8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 CXorf58Q96LI9 332 aa8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 SMIM3Q9BZL3 60 aa8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 GAR1Q9NY12 217 aaKnown RBP8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 LINC00527Q9UJ94 153 aa8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 NIPBLQ6KC79 2804 aaeCLIP8.28□□□□□ -1.08
HLA-DMB-261ENST00000487996 TRBV9A0A0B4J1U6 114 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 A0A0G2JLM5 398 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 SMCO3A2RU48 225 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 MPDU1O75352 247 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 MT-CO2P00403 227 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms