RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 OR10A3P58181 314 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 GNG2P59768 71 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 NUTF2P61970 127 aaKnown RBP2.4□□□□□ -2.03
GPNMB-212ENST00000487890 HIST1H3AP68431 136 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 DEFA6Q01524 100 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 PRB3Q04118 309 aaPredicted RBP2.4□□□□□ -2.03
GPNMB-212ENST00000487890 APOFQ13790 326 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 KIAA0087Q14695 138 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 PSG5Q15238 335 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF726P1Q15940 193 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 RSPO1Q2MKA7 263 aaPredicted RBP2.4□□□□□ -2.03
GPNMB-212ENST00000487890 DEFB112Q30KQ8 113 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 C15orf32Q32M92 178 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF404Q494X3 552 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 AKIRIN2Q53H80 203 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 PDZD11Q5EBL8 140 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 HIST2H3PS2Q5TEC6 136 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 HIST2H3AQ71DI3 136 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 OR2W3Q7Z3T1 314 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 TMEM61Q8N0U2 210 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 PNKDQ8N490 385 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 STX19Q8N4C7 294 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 ZFP41Q8N8Y5 198 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 LFNGQ8NES3 379 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 OR10R2Q8NGX6 335 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 SGMS2Q8NHU3 365 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 STOML3Q8TAV4 291 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 THEM6Q8WUY1 208 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 CPNE2Q96FN4 548 aaPredicted RBP2.4□□□□□ -2.03
GPNMB-212ENST00000487890 REEP6Q96HR9 211 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF488Q96MN9 340 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 CCL13Q99616 98 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 PHB2Q99623 299 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 C2orf88Q9BSF0 95 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 TMEM208Q9BTX3 173 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 RTL8AQ9BWD3 113 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 MRPS26Q9BYN8 205 aaKnown RBP2.4□□□□□ -2.03
GPNMB-212ENST00000487890 TMEM138Q9NPI0 162 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.4□□□□□ -2.03
GPNMB-212ENST00000487890 VPREB3Q9UKI3 123 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 BAIAP2Q9UQB8 552 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 ST3GAL6Q9Y274 331 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 ALG5Q9Y673 324 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 PRKDCP78527 4128 aaKnown RBP2.39□□□□□ -2.03
GPNMB-212ENST00000487890 TGIF2-C20orf24A0A0A6YYL0 155 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 IGHV1-69DA0A0B4J2H0 117 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 KIR2DS1A0A191URI9 304 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 SMIM9A6NGZ8 99 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF850A8MQ14 1090 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 KRTAP4-16G5E9R7 235 aaPredicted RBP2.39□□□□□ -2.03
GPNMB-212ENST00000487890 H3BSH0 61 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 M0R129 80 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 GYG2O15488 501 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 NDUFB3O43676 98 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 ANGPTL7O43827 346 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 FKBP6O75344 327 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 FAM107AO95990 144 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 IGHV1-69P01742 117 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 HBE1P02100 147 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 TFF1P04155 84 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 MDKP21741 143 aaPredicted RBP2.39□□□□□ -2.03
GPNMB-212ENST00000487890 GNRHRP30968 328 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 MAP2K4P45985 399 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 CAV2P51636 162 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 RND2P52198 227 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 AP2S1P53680 142 aaPredicted RBP2.39□□□□□ -2.03
GPNMB-212ENST00000487890 HCCSP53701 268 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 OR2B8PP59922 312 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 IL5RAQ01344 420 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 MXD1Q05195 221 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 PRDX4Q13162 271 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 KLRD1Q13241 179 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 CLINT1Q14677 625 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 GINS1Q14691 196 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF181Q2M3W8 571 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 KRTAP27-1Q3LI81 207 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 LRRC10Q5BKY1 277 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 TCTEX1D4Q5JR98 221 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 OR10J3Q5JRS4 329 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 ACTL10Q5JWF8 245 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 SYT6Q5T7P8 510 aaPredicted RBP2.39□□□□□ -2.03
GPNMB-212ENST00000487890 BCL2L15Q5TBC7 163 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 TMEM236Q5W0B7 351 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 LCN8Q6JVE9 175 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 LINC00173Q6ZV60 143 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 SLC36A1Q7Z2H8 476 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 VMO1Q7Z5L0 202 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 TMED4Q7Z7H5 227 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 TMEM179BQ7Z7N9 219 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 LGI3Q8N145 548 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 STPG2Q8N412 459 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 FAM216BQ8N7L0 139 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 OR1M1Q8NGA1 313 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 OR8B12Q8NGG6 310 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 SEH1LQ96EE3 360 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 SDHCQ99643 169 aaPredicted RBP2.39□□□□□ -2.03
GPNMB-212ENST00000487890 ARL6Q9H0F7 186 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 TLNRD1Q9H1K6 362 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 SLC25A22Q9H936 323 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 WFDC1Q9HC57 220 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms