RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 ZNF114Q8NC26 417 aa6.29□□□□□ -1.4
PRKCB-208ENST00000487674 TMEM116Q8NCL8 245 aa6.29□□□□□ -1.4
PRKCB-208ENST00000487674 OR6F1Q8NGZ6 308 aa6.29□□□□□ -1.4
PRKCB-208ENST00000487674 GATAD1Q8WUU5 269 aa6.29□□□□□ -1.4
PRKCB-208ENST00000487674 PHLDA1Q8WV24 401 aaPredicted RBP6.29□□□□□ -1.4
PRKCB-208ENST00000487674 ZNF414Q96IQ9 312 aa6.29□□□□□ -1.4
PRKCB-208ENST00000487674 OR10C1Q96KK4 312 aa6.29□□□□□ -1.4
PRKCB-208ENST00000487674 RNF2Q99496 336 aa6.29□□□□□ -1.4
PRKCB-208ENST00000487674 RHPN1-AS1Q9BWJ2 59 aa6.29□□□□□ -1.4
PRKCB-208ENST00000487674 FAM212BQ9NTI7 297 aaPredicted RBP6.29□□□□□ -1.4
PRKCB-208ENST00000487674 DBX1A6NMT0 343 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 MPTX1A8MV57 137 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 I3L2K1 104 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 CHEK1O14757 476 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 ATP6V1G2O95670 118 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 HRH1P35367 487 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 MFAP4P55083 255 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 KCTD21Q4G0X4 260 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 PHLDA2Q53GA4 152 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 LGALS9CQ6DKI2 356 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 APRG1Q8IVJ8 170 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 RPP25LQ8N5L8 163 aaKnown RBP6.28□□□□□ -1.4
PRKCB-208ENST00000487674 SAMD12Q8N8I0 201 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 SLC25A46Q96AG3 418 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 MISP3Q96FF7 219 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 CMTM3Q96MX0 182 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 TXN2Q99757 166 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 NXF2Q9GZY0 626 aaKnown RBP6.28□□□□□ -1.4
PRKCB-208ENST00000487674 MFFQ9GZY8 342 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 CSTL1Q9H114 145 aa6.28□□□□□ -1.4
PRKCB-208ENST00000487674 C11orf68Q9H3H3 251 aaKnown RBP6.28□□□□□ -1.4
PRKCB-208ENST00000487674 IGHV3-49A0A0A0MS15 119 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 TRAV14DV4A0A0A6YYC5 116 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 YIF1AO95070 293 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 MT-CO2P00403 227 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 CD5P06127 495 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 PRSS3P35030 304 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 TFPI2P48307 235 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 PRCDQ00LT1 54 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 FAM90A2PQ658T7 463 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 LPCAT3Q6P1A2 487 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 H2BFWTQ7Z2G1 175 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 TBC1D26Q86UD7 250 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 OR4A16Q8NH70 328 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 SEC22AQ96IW7 307 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 RARRES2Q99969 163 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 GINS3Q9BRX5 216 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.27□□□□□ -1.41
PRKCB-208ENST00000487674 FRAS1Q86XX4 4008 aa6.27□□□□□ -1.41
PRKCB-208ENST00000487674 IGKV3-7A0A075B6H7 116 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 TRAV2A0A0B4J234 112 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 GNG7O60262 68 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 DEDDO75618 318 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 CA1P00915 261 aaPredicted RBP6.26□□□□□ -1.41
PRKCB-208ENST00000487674 EIF4EP06730 217 aaKnown RBP6.26□□□□□ -1.41
PRKCB-208ENST00000487674 HLA-DMAP28067 261 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 RCVRNP35243 200 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 TGFBR1P36897 503 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 RPS19P39019 145 aaKnown RBP6.26□□□□□ -1.41
PRKCB-208ENST00000487674 PAFAH1B2P68402 229 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 RBMS2Q15434 407 aaKnown RBP6.26□□□□□ -1.41
PRKCB-208ENST00000487674 TCF24Q7RTU0 167 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 LYSMD2Q8IV50 215 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 OR11H2Q8NH07 326 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 C11orf45Q8TAV5 145 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 GPX8Q8TED1 209 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 MRGPRFQ96AM1 343 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 SCPEP1Q9HB40 452 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 KMT2AQ03164 3969 aa6.26□□□□□ -1.41
PRKCB-208ENST00000487674 IGHV3OR16-13A0A075B7E8 117 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 IGHV3-74A0A0B4J1X5 117 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 ST8SIA3O43173 380 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 DFFBO76075 338 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 IGKV1-39P01597 117 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 IGHV3-48P01763 117 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 IGKV1D-39P04432 117 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 NPBWR1P48145 328 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 UCP3P55916 312 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 TCTAP57738 103 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 NANOS2P60321 138 aaKnown RBP6.25□□□□□ -1.41
PRKCB-208ENST00000487674 HSPE1P61604 102 aaKnown RBP6.25□□□□□ -1.41
PRKCB-208ENST00000487674 TSPAN5P62079 268 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 ERHP84090 104 aaKnown RBP6.25□□□□□ -1.41
PRKCB-208ENST00000487674 TOMM20LQ6UXN7 152 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 GBGT1Q8N5D6 347 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 ST8SIA2Q92186 375 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 PINX1Q96BK5 328 aaKnown RBP6.25□□□□□ -1.41
PRKCB-208ENST00000487674 MS4A6AQ9H2W1 248 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 VSIRQ9H7M9 311 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 FBXL17Q9UF56 701 aa6.25□□□□□ -1.41
PRKCB-208ENST00000487674 INS-IGF2F8WCM5 200 aa6.24□□□□□ -1.41
PRKCB-208ENST00000487674 CORTO00230 105 aa6.24□□□□□ -1.41
PRKCB-208ENST00000487674 APOA1P02647 267 aa6.24□□□□□ -1.41
PRKCB-208ENST00000487674 IFNA4P05014 189 aa6.24□□□□□ -1.41
PRKCB-208ENST00000487674 TMEM187Q14656 261 aa6.24□□□□□ -1.41
PRKCB-208ENST00000487674 ZNF600Q6ZNG1 722 aa6.24□□□□□ -1.41
PRKCB-208ENST00000487674 SLC35G3Q8N808 338 aa6.24□□□□□ -1.41
PRKCB-208ENST00000487674 DUSP18Q8NEJ0 188 aa6.24□□□□□ -1.41
PRKCB-208ENST00000487674 YIPF6Q96EC8 236 aa6.24□□□□□ -1.41
PRKCB-208ENST00000487674 TMEM231Q9H6L2 316 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms