RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 IGLV1-40P01703 118 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 CRYBA1P05813 215 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 NTF3P20783 257 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 CRHBPP24387 322 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 PSMB2P49721 201 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 LHX2P50458 406 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 CRYBA2P53672 197 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 MFAP2P55001 183 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 ZNF155Q12901 538 aaPredicted RBP4.35□□□□□ -1.71
SF1-217ENST00000486960 GPR18Q14330 331 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 P2RY6Q15077 328 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 SBSNQ6UWP8 590 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 GFRALQ6UXV0 394 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 ZNF793Q6ZN11 406 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 TCF23Q7RTU1 214 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 AMIGO2Q86SJ2 522 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 C10orf82Q8WW14 230 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 TMEM106AQ96A25 262 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 ZNF501Q96CX3 271 aaPredicted RBP4.35□□□□□ -1.71
SF1-217ENST00000486960 SMIM8Q96KF7 97 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 MGLLQ99685 303 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 PRADC1Q9BSG0 188 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 SLC25A31Q9H0C2 315 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 C20orf85Q9H1P6 137 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 ZNF331Q9NQX6 463 aaPredicted RBP4.35□□□□□ -1.71
SF1-217ENST00000486960 OCIAD1Q9NX40 245 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 SCN3BQ9NY72 215 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 NAT8Q9UHE5 227 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 KLF13Q9Y2Y9 288 aaPredicted RBP4.35□□□□□ -1.71
SF1-217ENST00000486960 MED31Q9Y3C7 131 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 FREM1Q5H8C1 2179 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 STAB2Q8WWQ8 2551 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 TMED7-TICAM2A0A0A6YYA0 188 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 SPTY2D1-AS1A0A0U1RR47 76 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 LOC102725191A0A1B0GVB3 256 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 A0A1B0GXF2 115 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 PLAC8L1A1L4L8 177 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 RBMY1BA6NDE4 496 aaKnown RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 RBMY1EA6NEQ0 496 aaKnown RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 A8MT66 165 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 C8orf87E5RJ46 101 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 UPK2O00526 184 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 NDUFS5O43920 106 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 EDF1O60869 148 aaKnown RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 SCRG1O75711 98 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 AMBPP02760 352 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 ADRA2AP08913 450 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 RBMY1DP0C7P1 496 aaKnown RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 RBMY1A1P0DJD3 496 aaKnown RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 IGHV4-30-4P0DP06 118 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 CTLA4P16410 223 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 RPS4Y1P22090 263 aaKnown RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 ATP6V0CP27449 155 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 GABRA3P34903 492 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 PRSS3P35030 304 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 SLC25A1P53007 311 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 RHOGP84095 191 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 FABP5Q01469 135 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 FABP9Q0Z7S8 132 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 JOSD1Q15040 202 aaPredicted RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 MMDQ15546 238 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 TMEM241Q24JQ0 296 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 C12orf74Q32Q52 190 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 ZFP69Q49AA0 526 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 LINC00242Q5T6M2 205 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 TSPO2Q5TGU0 170 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 FBXW12Q6X9E4 464 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 SGPP2Q8IWX5 399 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 C11orf53Q8IXP5 236 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 RBPMSQ93062 196 aaKnown RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 SLC25A44Q96H78 314 aaPredicted RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 PGLYRP4Q96LB8 373 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 ZNF300Q96RE9 604 aaPredicted RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 HSD17B10Q99714 261 aaKnown RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 MRPL57Q9BQC6 102 aaKnown RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 RHNO1Q9BSD3 238 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 SLIRPQ9GZT3 109 aaKnown RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 MED9Q9NWA0 146 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 BOKQ9UMX3 212 aaPredicted RBP4.34□□□□□ -1.71
SF1-217ENST00000486960 V9GY05 133 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 PCM1Q15154 2024 aa4.34□□□□□ -1.71
SF1-217ENST00000486960 MED12Q93074 2177 aa4.34□□□□□ -1.72
SF1-217ENST00000486960 CADP27708 2225 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 LOC102724200A0A096LPH7 203 aaPredicted RBP4.33□□□□□ -1.72
SF1-217ENST00000486960 TRGV8A0A0C4DH27 118 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 TMEM72A0PK05 275 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 DNASE2O00115 360 aaPredicted RBP4.33□□□□□ -1.72
SF1-217ENST00000486960 PHOX2AO14813 284 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 SNAPC5O75971 98 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 KCNK2O95069 426 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 IFNA7P01567 189 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 HLA-DRB1P01911 266 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 SNRPCP09234 159 aaKnown RBP4.33□□□□□ -1.72
SF1-217ENST00000486960 TRAPPC2P0DI81 140 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 TRAPPC2BP0DI82 140 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 CT45A10P0DMU9 189 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 BRS3P32247 399 aa4.33□□□□□ -1.72
SF1-217ENST00000486960 PPP1CCP36873 323 aaKnown RBP4.33□□□□□ -1.72
SF1-217ENST00000486960 RPL29P47914 159 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms