RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 CSN3P07498 182 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 VAMP1P23763 118 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 ARL3P36405 182 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 ASAH1Q13510 395 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 ZNF846Q147U1 533 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 SPSB3Q6PJ21 355 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 CLEC19AQ6UXS0 136 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 ZNF414Q96IQ9 312 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 TXN2Q99757 166 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 ELOVL1Q9BW60 279 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 ZNF436Q9C0F3 470 aaPredicted RBP10.03□□□□□ -0.8
SF1-216ENST00000486867 C21orf62Q9NYP8 219 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 TBC1D24Q9ULP9 559 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 FLVCR2Q9UPI3 526 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 TMED3Q9Y3Q3 217 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 S4R3C0 116 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 COL7A1Q02388 2944 aa10.03□□□□□ -0.8
SF1-216ENST00000486867 LINC00854A0A1B0GVQ3 168 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 K7EIL1 84 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 UPK1BO75841 260 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 IGHV3-23P01764 117 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 CLEC3BP05452 202 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 OR4E1P0C645 316 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 TNFRSF9Q07011 255 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 DHRS2Q13268 280 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 TATDN3Q17R31 274 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 SPINK9Q5DT21 86 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 ADAMTSL5Q6ZMM2 481 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 LYG2Q86SG7 212 aa10.02□□□□□ -0.81
SF1-216ENST00000486867 BSCL2Q96G97 398 aaPredicted RBP10.02□□□□□ -0.81
SF1-216ENST00000486867 WI2-2373I1.2A0A1W2PRP0 233 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 FAM90A26D6RGX4 464 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 CORTO00230 105 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 TGOLN2O43493 480 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 SAP30O75446 220 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 OR2C1O95371 312 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 PRB2P02812 416 aaPredicted RBP10.01□□□□□ -0.81
SF1-216ENST00000486867 TCRBP04435 133 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 GPR183P32249 361 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 ADMP35318 185 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 SNCAP37840 140 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 HTR2BP41595 481 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 HOXA1P49639 335 aaPredicted RBP10.01□□□□□ -0.81
SF1-216ENST00000486867 SUB1P53999 127 aaKnown RBP eCLIP10.01□□□□□ -0.81
SF1-216ENST00000486867 C2orf83Q53S99 150 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 OR4C12Q96R67 309 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 C20orf85Q9H1P6 137 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 GAR1Q9NY12 217 aaKnown RBP10.01□□□□□ -0.81
SF1-216ENST00000486867 PEMTQ9UBM1 199 aa10.01□□□□□ -0.81
SF1-216ENST00000486867 MT-CO2P00403 227 aa10□□□□□ -0.81
SF1-216ENST00000486867 CTSGP08311 255 aa10□□□□□ -0.81
SF1-216ENST00000486867 ANXA7P20073 488 aaKnown RBP10□□□□□ -0.81
SF1-216ENST00000486867 ELLP55199 621 aaPredicted RBP10□□□□□ -0.81
SF1-216ENST00000486867 IFITM3Q01628 133 aa10□□□□□ -0.81
SF1-216ENST00000486867 TMEM170AQ8WVE7 144 aa10□□□□□ -0.81
SF1-216ENST00000486867 ENY2Q9NPA8 101 aa10□□□□□ -0.81
SF1-216ENST00000486867 ZNF256Q9Y2P7 627 aaPredicted RBP10□□□□□ -0.81
SF1-216ENST00000486867 TMEM213A2RRL7 107 aa9.99□□□□□ -0.81
SF1-216ENST00000486867 C2orf70A6NJV1 201 aa9.99□□□□□ -0.81
SF1-216ENST00000486867 C8orf88P0DMB2 117 aa9.99□□□□□ -0.81
SF1-216ENST00000486867 MFAP4P55083 255 aa9.99□□□□□ -0.81
SF1-216ENST00000486867 ATP5IP56385 69 aaPredicted RBP9.99□□□□□ -0.81
SF1-216ENST00000486867 FAM106AQ4KMX7 169 aa9.99□□□□□ -0.81
SF1-216ENST00000486867 PLET1Q6UQ28 207 aa9.99□□□□□ -0.81
SF1-216ENST00000486867 OR2K2Q8NGT1 345 aa9.99□□□□□ -0.81
SF1-216ENST00000486867 RNASEH2CQ8TDP1 164 aaKnown RBP9.99□□□□□ -0.81
SF1-216ENST00000486867 MITD1Q8WV92 249 aa9.99□□□□□ -0.81
SF1-216ENST00000486867 TMEM190Q8WZ59 177 aa9.99□□□□□ -0.81
SF1-216ENST00000486867 MISP3Q96FF7 219 aa9.99□□□□□ -0.81
SF1-216ENST00000486867 CHRDL1Q9BU40 450 aa9.99□□□□□ -0.81
SF1-216ENST00000486867 FNDC4Q9H6D8 234 aaPredicted RBP9.99□□□□□ -0.81
SF1-216ENST00000486867 LSM4Q9Y4Z0 139 aaKnown RBP9.99□□□□□ -0.81
SF1-216ENST00000486867 OR2T8A6NH00 312 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 CEBPZOSA8MTT3 80 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 NDUFA4O00483 81 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 GGNBP1Q5YKI7 109 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 MZT2BQ6NZ67 158 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 UNQ9165/PRO28630Q6UXU0 137 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 SLC24A4Q8NFF2 622 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 COQ8AQ8NI60 647 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 RBKSQ9H477 322 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 HEYLQ9NQ87 328 aaPredicted RBP9.98□□□□□ -0.81
SF1-216ENST00000486867 ZC4H2Q9NQZ6 224 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 NUDT15Q9NV35 164 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 U3KQ87 197 aa9.98□□□□□ -0.81
SF1-216ENST00000486867 IGHV3-21A0A0B4J1V1 117 aa9.97□□□□□ -0.81
SF1-216ENST00000486867 SPNP16150 400 aa9.97□□□□□ -0.81
SF1-216ENST00000486867 CBLN1P23435 193 aa9.97□□□□□ -0.81
SF1-216ENST00000486867 DCTN2Q13561 401 aaKnown RBP9.97□□□□□ -0.81
SF1-216ENST00000486867 NOXA1Q86UR1 476 aa9.97□□□□□ -0.81
SF1-216ENST00000486867 DUSP18Q8NEJ0 188 aa9.97□□□□□ -0.81
SF1-216ENST00000486867 OR4X1Q8NH49 305 aa9.97□□□□□ -0.81
SF1-216ENST00000486867 OR1S1Q8NH92 325 aa9.97□□□□□ -0.81
SF1-216ENST00000486867 MRAPQ8TCY5 172 aa9.97□□□□□ -0.81
SF1-216ENST00000486867 DTD1Q8TEA8 209 aa9.97□□□□□ -0.81
SF1-216ENST00000486867 MARC2Q969Z3 335 aa9.97□□□□□ -0.81
SF1-216ENST00000486867 HIPK2Q9H2X6 1198 aa9.97□□□□□ -0.81
SF1-216ENST00000486867 TECRQ9NZ01 308 aaKnown RBP9.97□□□□□ -0.81
SF1-216ENST00000486867 FAM240BA0A1B0GVZ2 78 aa9.96□□□□□ -0.82
SF1-216ENST00000486867 K7EMT4 169 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms