RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 IGHV1-46P01743 117 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 LMO4P61968 165 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 AESQ08117 197 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 RTL8BQ17RB0 113 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 OR51G1Q8NGK1 321 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 COQ2Q96H96 371 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 S1PR3Q99500 378 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 GPR61Q9BZJ8 451 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 MSL2Q9HCI7 577 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 HEYLQ9NQ87 328 aaPredicted RBP7.36□□□□□ -1.23
COL12A1-208ENST00000486533 UFSP2Q9NUQ7 469 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 PSG11Q9UQ72 335 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 XKRY2A2RUG3 117 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 HMGB3O15347 200 aaKnown RBP7.35□□□□□ -1.23
COL12A1-208ENST00000486533 PAGE4O60829 102 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 RAMP3O60896 148 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 MDKP21741 143 aaPredicted RBP7.35□□□□□ -1.23
COL12A1-208ENST00000486533 PRDX2P32119 198 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 DUTP33316 252 aaKnown RBP7.35□□□□□ -1.23
COL12A1-208ENST00000486533 CFHR2P36980 270 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 THBS3P49746 956 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 SSTP61278 116 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 RHOBP62745 196 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 RPL30P62888 115 aaKnown RBP7.35□□□□□ -1.23
COL12A1-208ENST00000486533 JOSD1Q15040 202 aaPredicted RBP7.35□□□□□ -1.23
COL12A1-208ENST00000486533 COX19Q49B96 90 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 ACTL10Q5JWF8 245 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 SSX7Q7RTT5 188 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 REC114Q7Z4M0 266 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 OR4X1Q8NH49 305 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 ABHD5Q8WTS1 349 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 LRRC29Q8WV35 223 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 LY96Q9Y6Y9 160 aa7.35□□□□□ -1.23
COL12A1-208ENST00000486533 NBEAL1Q6ZS30 2694 aa7.34□□□□□ -1.23
COL12A1-208ENST00000486533 A0A1W2PPQ1 181 aa7.34□□□□□ -1.23
COL12A1-208ENST00000486533 SRRM5B3KS81 715 aa7.34□□□□□ -1.23
COL12A1-208ENST00000486533 F2RL2O00254 374 aa7.34□□□□□ -1.23
COL12A1-208ENST00000486533 MLNRO43193 412 aa7.34□□□□□ -1.23
COL12A1-208ENST00000486533 FOXL1Q12952 345 aa7.34□□□□□ -1.23
COL12A1-208ENST00000486533 LINC00469Q8N7U9 141 aa7.34□□□□□ -1.23
COL12A1-208ENST00000486533 OR13A1Q8NGR1 328 aa7.34□□□□□ -1.23
COL12A1-208ENST00000486533 HIST1H2BLQ99880 126 aa7.34□□□□□ -1.23
COL12A1-208ENST00000486533 NPVFQ9HCQ7 196 aa7.34□□□□□ -1.23
COL12A1-208ENST00000486533 TANC2Q9HCD6 1990 aa7.34□□□□□ -1.23
COL12A1-208ENST00000486533 IFITM10A6NMD0 228 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 C15orf62A8K5M9 175 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 C15orf65H3BRN8 121 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 M0R1X1 148 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 FCGR3BO75015 233 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 IGKV1D-33P01593 117 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 IGKV1-33P01594 117 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 TNFSF4P23510 183 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 GATA4P43694 442 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 RAB4BP61018 213 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 TNFAIP6P98066 277 aaPredicted RBP7.33□□□□□ -1.24
COL12A1-208ENST00000486533 SCGB2A2Q13296 93 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 IQCJQ1A5X6 159 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 CST9LP1Q5W188 147 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 BTNL3Q6UXE8 466 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 C11orf53Q8IXP5 236 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 Q8N3U1 123 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 OR2Z1Q8NG97 314 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 UBALD1Q8TB05 177 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 QTRT1Q9BXR0 403 aaKnown RBP7.33□□□□□ -1.24
COL12A1-208ENST00000486533 FKBP11Q9NYL4 201 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 DYSFO75923 2080 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 TRBV9A0A0B4J1U6 114 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 PHOX2AO14813 284 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 CD55P08174 381 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 STAG3L2P0CL84 134 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 STAG3L3P0CL85 134 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 DDTP30046 118 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 SSTR5P35346 364 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 CEBPDP49716 269 aaPredicted RBP7.33□□□□□ -1.24
COL12A1-208ENST00000486533 CNN1P51911 297 aaKnown RBP7.33□□□□□ -1.24
COL12A1-208ENST00000486533 MORN2Q502X0 79 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 SPRNQ5BIV9 151 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 TEPPQ6URK8 271 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 SLC35E1Q96K37 410 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 RNF2Q99496 336 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 FAM234AQ9H0X4 552 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 TMEM167BQ9NRX6 74 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 SLC25A10Q9UBX3 287 aaPredicted RBP7.33□□□□□ -1.24
COL12A1-208ENST00000486533 PRNDQ9UKY0 176 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 PXMP4Q9Y6I8 212 aa7.33□□□□□ -1.24
COL12A1-208ENST00000486533 ARHGAP32A7KAX9 2087 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 TENM1Q9UKZ4 2725 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 LOC105371242A0A075B767 164 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 TRGV10A0A0A0MS01 117 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 C15orf61A6NNL5 157 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 C9JCJ5 164 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 TNFRSF1AP19438 455 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 NPY1RP25929 384 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 TAS2R45P59539 299 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 EDDM3AQ14507 147 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 PDZD11Q5EBL8 140 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 ZNF826PQ6ZT77 177 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 C8orf86Q6ZUL3 223 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 SSX9Q7RTT3 188 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 LINC01551Q86U37 167 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms