RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 RPS11P62280 158 aaKnown RBP eCLIP3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 FKBP1AP62942 108 aaKnown RBP3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 PNOCQ13519 176 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 NWD1Q149M9 1564 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 ZNF141Q15928 474 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 LINC00242Q5T6M2 205 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 FAM222AQ5U5X8 452 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 CDC42BPAQ5VT25 1732 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 LCN12Q6JVE5 192 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 ACP7Q6ZNF0 438 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 TEX43Q6ZNM6 134 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 TRPT1Q86TN4 253 aaKnown RBP3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 GTSCR1Q86UQ5 136 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 NLRC5Q86WI3 1866 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 ATOH7Q8N100 152 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 STPG4Q8N801 248 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 ZNF709Q8N972 641 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 OR5D16Q8NGK9 328 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 OR2A12Q8NGT7 310 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 OR2T27Q8NH04 317 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 OR4K13Q8NH42 304 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 SGMS2Q8NHU3 365 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 CCL17Q92583 94 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 ELSPBP1Q96BH3 223 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 IMMP2LQ96T52 175 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 LINC01587Q99440 93 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 SDF2Q99470 211 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 SPIN2AQ99865 258 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 SPIN2BQ9BPZ2 258 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 ADAT1Q9BUB4 502 aaKnown RBP3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 TRPM3Q9HCF6 1732 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 TMEM100Q9NV29 134 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 ZNF226Q9NYT6 803 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 CKLFQ9UBR5 152 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 LINC00527Q9UJ94 153 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 PCTPQ9UKL6 214 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 ZNF256Q9Y2P7 627 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 AMMECR1Q9Y4X0 333 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 HES2Q9Y543 173 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 ALPK3Q96L96 1907 aa3.23□□□□□ -1.89
R3HDM1-217ENST00000486532 HECW1Q76N89 1606 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 ANKARQ7Z5J8 1434 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 TRAV27A0A087WT01 109 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 TRAV8-3A0A0A6YYJ7 113 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 LOC107984640A0A0U1RRK4 108 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 A0A1B0GVY2 172 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 OR2T8A6NH00 312 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 H3BP45 60 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 GEMIN2O14893 280 aaKnown RBP3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 UBE2L6O14933 153 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 PSPHP1O15172 72 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 NDUFB2O95178 105 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 CYB5AP00167 134 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 MT-ND6P03923 174 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 RBMY1CP0DJD4 496 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 PYYP10082 97 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 RPL22P35268 128 aaKnown RBP3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 SRP14P37108 136 aaKnown RBP3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 CA7P43166 264 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 MFAP2P55001 183 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 RPS23P62266 143 aaKnown RBP3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 HERVK_113P63121 156 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 ZNF90Q03938 601 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 KIAA0040Q15053 153 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 ADIRFQ15847 76 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 C14orf177Q52M58 125 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 PAPPA-AS1Q5QFB9 102 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 LINC01545Q5VT33 79 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 C1orf140Q5VVS0 124 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 Q6AWC8 147 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 Q6ZS49 121 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 SLC25A26Q70HW3 274 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 ATP5L2Q7Z4Y8 100 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 RPS19BP1Q86WX3 136 aaKnown RBP3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 C10orf126Q8N4M7 172 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 LINC00301Q8NCQ3 95 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 C2orf15Q8WU43 125 aaKnown RBP3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 MS4A6EQ96DS6 147 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 SLC25A38Q96DW6 304 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 PGLYRP4Q96LB8 373 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 YPEL4Q96NS1 127 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 ZNF300Q96RE9 604 aaPredicted RBP3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 GPX7Q96SL4 187 aaPredicted RBP3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 C19orf24Q9BVV8 132 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 TSSK6Q9BXA6 273 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 PARLQ9H300 379 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 RBM12B-AS1Q9P1G2 102 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 OR5V1Q9UGF6 321 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 ANAPC10Q9UM13 185 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 PYGO1Q9Y3Y4 419 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 CHCHD2Q9Y6H1 151 aaPredicted RBP3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 SMAD5-AS1Q9Y6J3 95 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 V9GY05 133 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 C3P01024 1663 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 ROBO1Q9Y6N7 1651 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 PDE4DIPQ5VU43 2346 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 HCFC1P51610 2035 aa3.22□□□□□ -1.89
R3HDM1-217ENST00000486532 DOCK4Q8N1I0 1966 aa3.21□□□□□ -1.89
R3HDM1-217ENST00000486532 ANAPC1Q9H1A4 1944 aa3.21□□□□□ -1.9
R3HDM1-217ENST00000486532 KIF1AQ12756 1690 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms