RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 ARL16Q0P5N6 197 aa10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 CLINT1Q14677 625 aa10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 EIF5AL1Q6IS14 154 aaKnown RBP10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 HAPLN4Q86UW8 402 aa10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 UBAC2Q8NBM4 344 aa10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 SCGB1C1Q8TD33 95 aa10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 BSCL2Q96G97 398 aaPredicted RBP10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 PARD6GQ9BYG4 376 aaPredicted RBP10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 SLA2Q9H6Q3 261 aa10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 NPVFQ9HCQ7 196 aa10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 CYTL1Q9NRR1 136 aa10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 UQCC1Q9NVA1 299 aa10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 FBXO7Q9Y3I1 522 aa10.45□□□□□ -0.74
VTI1BP1-201ENST00000486325 DNAJC9-AS1A6NH13 148 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 SH2D7A6NKC9 451 aaPredicted RBP10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 LINC01548A6NM66 108 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 INAFM1C9JVW0 142 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 PRSS46E5RG02 174 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 CRLF1O75462 422 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 CRYBA1P05813 215 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 APELAP0DMC3 54 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 HILS1P60008 231 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 CD69Q07108 199 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 VWC2Q2TAL6 325 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 KLK9Q2XQG4 91 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 ASPHD1Q5U4P2 390 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 BAP18Q8IXM2 172 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 OR5T1Q8NG75 326 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 STOML3Q8TAV4 291 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 WFDC1Q9HC57 220 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 KLK9Q9UKQ9 250 aa10.44□□□□□ -0.74
VTI1BP1-201ENST00000486325 HIVEP1P15822 2718 aa10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 MXRA5Q9NR99 2828 aa10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 H3BUA1 57 aa10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 MPDU1O75352 247 aa10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 BRI3O95415 125 aa10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 OPRK1P41145 380 aa10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 ECSCRQ19T08 205 aa10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 ARSJQ5FYB0 599 aaPredicted RBP10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 RPL7L1Q6DKI1 246 aaKnown RBP10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 Q71RC1 249 aaPredicted RBP10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 GNPNAT1Q96EK6 184 aaPredicted RBP10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 PHYHIPLQ96FC7 376 aa10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 MISP3Q96FF7 219 aa10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 SLC35E1Q96K37 410 aa10.43□□□□□ -0.74
VTI1BP1-201ENST00000486325 IFNA7P01567 189 aa10.42□□□□□ -0.74
VTI1BP1-201ENST00000486325 RNASE1P07998 156 aaKnown RBP10.42□□□□□ -0.74
VTI1BP1-201ENST00000486325 RAB31Q13636 194 aa10.42□□□□□ -0.74
VTI1BP1-201ENST00000486325 Q8N2B8 174 aa10.42□□□□□ -0.74
VTI1BP1-201ENST00000486325 ST8SIA2Q92186 375 aa10.42□□□□□ -0.74
VTI1BP1-201ENST00000486325 ARV1Q9H2C2 271 aa10.42□□□□□ -0.74
VTI1BP1-201ENST00000486325 SETXQ7Z333 2677 aaKnown RBP10.42□□□□□ -0.74
VTI1BP1-201ENST00000486325 CELSR1Q9NYQ6 3014 aa10.42□□□□□ -0.74
VTI1BP1-201ENST00000486325 ZNF469Q96JG9 3925 aaPredicted RBP10.42□□□□□ -0.74
VTI1BP1-201ENST00000486325 MTORP42345 2549 aa10.42□□□□□ -0.74
VTI1BP1-201ENST00000486325 IGLV11-55A0A075B6I3 123 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 SMCO3A2RU48 225 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 TMEM89A2RUT3 159 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 G3V318 75 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 SOX15O60248 233 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 MFAP2P55001 183 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 C19orf54Q5BKX5 351 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 TEPPQ6URK8 271 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 TEX261Q6UWH6 196 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 SLC16A13Q7RTY0 426 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 TMEM144Q7Z5S9 345 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 ZNF709Q8N972 641 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 FANCD2OSQ96PS1 177 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 DUX5Q96PT3 197 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 GINS3Q9BRX5 216 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 WDR61Q9GZS3 305 aaKnown RBP10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 ZNF355PQ9NSJ1 428 aa10.41□□□□□ -0.74
VTI1BP1-201ENST00000486325 TRBV9A0A0B4J1U6 114 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 FAM181BA6NEQ2 426 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 C17orf112F2Z3M2 114 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 I3L2K1 104 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 MT-CO2P00403 227 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 SEC11BP0C7V7 166 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 PPIFP30405 207 aaKnown RBP10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 SLC35B1P78383 322 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 AKR1C1Q04828 323 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 GAMTQ14353 236 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 BTNL8Q6UX41 500 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 TREML4Q6UXN2 200 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 Q6ZS46 218 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 NECAP1Q8NC96 275 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 TMEM116Q8NCL8 245 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 OR2T6Q8NHC8 308 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 VN1R17PQ8TDU5 208 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 TAF15Q92804 592 aaKnown RBP eCLIP10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 TXN2Q99757 166 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 FNDC4Q9H6D8 234 aaPredicted RBP10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 ZNF702PQ9H963 129 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 ESM1Q9NQ30 184 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 FBXL7Q9UJT9 491 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 WDR83OSQ9Y284 106 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 F8P00451 2351 aa10.4□□□□□ -0.74
VTI1BP1-201ENST00000486325 UBE2L5PA0A1B0GUS4 154 aa10.39□□□□□ -0.75
VTI1BP1-201ENST00000486325 FAM223BA6NKX1 122 aa10.39□□□□□ -0.75
VTI1BP1-201ENST00000486325 CYSRT1A8MQ03 144 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms