RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 COMPP49747 757 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-228ENST00000486227 SELENOTP62341 195 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 IL36BQ9NZH7 164 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 SLC25A15Q9Y619 301 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 GTF3C1Q12789 2109 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 F5H697 171 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 CA7P43166 264 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 KIAA1644Q3SXP7 199 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 SAPCD1Q5SSQ6 148 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 MRPL52Q86TS9 123 aaKnown RBP9.18□□□□□ -0.94
HDAC6-228ENST00000486227 LAMTOR2Q9Y2Q5 125 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 UTRNP46939 3433 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 A0A1W2PS18 150 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 CA2P00918 260 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 IGHV1-46P01743 117 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 PF4P02776 101 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 PRB3Q04118 309 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-228ENST00000486227 FAM106AQ4KMX7 169 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 ZNF324BQ6AW86 544 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-228ENST00000486227 JMJD8Q96S16 334 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 ZNF430Q9H8G1 570 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-228ENST00000486227 HIGD1AQ9Y241 93 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 TBL2Q9Y4P3 447 aaKnown RBP9.18□□□□□ -0.94
HDAC6-228ENST00000486227 TNFSF13O75888 250 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 P01737 135 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 CSN3P07498 182 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 ZNF146Q15072 292 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 NPIPB3Q92617 1050 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 WDR87Q6ZQQ6 2873 aa9.18□□□□□ -0.94
HDAC6-228ENST00000486227 DSCR9P59020 149 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 MEF2CQ06413 473 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-228ENST00000486227 C20orf204Q6ZNR8 217 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 PQLC2Q6ZP29 291 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 NPCDR1Q9BY65 106 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 LINC00312Q9Y6C7 94 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 RAMP3O60896 148 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 SERF1AO75920 110 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 HTN1P15515 57 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 COL8A1P27658 744 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 NTF4P34130 210 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 ZGRF1Q86YA3 2104 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 SRRM5B3KS81 715 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 TCF15Q12870 199 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 MORN2Q502X0 79 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 PIP4P1Q86T03 277 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 IMMP2LQ96T52 175 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 MBD3L4A6NDZ8 208 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-228ENST00000486227 MBD3L3A6NE82 208 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-228ENST00000486227 MBD3L5A6NJ08 208 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-228ENST00000486227 NAPSAO96009 420 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 MBD3L2Q8NHZ7 208 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-228ENST00000486227 OSR1Q8TAX0 266 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-228ENST00000486227 SSC4DQ8WTU2 575 aa9.17□□□□□ -0.94
HDAC6-228ENST00000486227 MRPL20Q9BYC9 149 aaKnown RBP9.17□□□□□ -0.94
HDAC6-228ENST00000486227 ZNF207O43670 478 aaKnown RBP9.16□□□□□ -0.94
HDAC6-228ENST00000486227 YPEL1O60688 119 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 ATOH7Q8N100 152 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 OR51G1Q8NGK1 321 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 YPEL2Q96QA6 119 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 ALKBH7Q9BT30 221 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-228ENST00000486227 EREGO14944 169 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 SMIM12Q96EX1 92 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 A0A0G2JNJ9 132 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 ZNF474Q6S9Z5 364 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-228ENST00000486227 DTX1Q86Y01 620 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-228ENST00000486227 RNASEH2CQ8TDP1 164 aaKnown RBP9.16□□□□□ -0.94
HDAC6-228ENST00000486227 METTL26Q96S19 204 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 Q9UFV3 132 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 CDC42EP3Q9UKI2 254 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 A6NNC1 897 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 LEPROTL1O95214 131 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 TFPI2P48307 235 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 MFAP4P55083 255 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 TMEM97Q5BJF2 176 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 MBNL2Q5VZF2 373 aaKnown RBP9.16□□□□□ -0.94
HDAC6-228ENST00000486227 HS3ST6Q96QI5 342 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 NABP2Q9BQ15 211 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 FBXL15Q9H469 300 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 METRNQ9UJH8 293 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 ABCA1O95477 2261 aa9.16□□□□□ -0.94
HDAC6-228ENST00000486227 SAA2-SAA4A0A096LPE2 208 aa9.15□□□□□ -0.94
HDAC6-228ENST00000486227 A8MWL6 223 aa9.15□□□□□ -0.94
HDAC6-228ENST00000486227 SAA2P0DJI9 122 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-228ENST00000486227 FXYD3Q14802 87 aa9.15□□□□□ -0.94
HDAC6-228ENST00000486227 SPSB3Q6PJ21 355 aa9.15□□□□□ -0.94
HDAC6-228ENST00000486227 BTF3P20290 206 aaKnown RBP9.15□□□□□ -0.94
HDAC6-228ENST00000486227 GCHFRP30047 84 aa9.15□□□□□ -0.94
HDAC6-228ENST00000486227 TFF3Q07654 80 aa9.15□□□□□ -0.94
HDAC6-228ENST00000486227 RIGQ13278 110 aa9.15□□□□□ -0.94
HDAC6-228ENST00000486227 STPG3Q8N7X2 389 aa9.15□□□□□ -0.94
HDAC6-228ENST00000486227 NPIPB11E5RHQ5 1161 aa9.15□□□□□ -0.95
HDAC6-228ENST00000486227 C8orf88P0DMB2 117 aa9.15□□□□□ -0.95
HDAC6-228ENST00000486227 ADMP35318 185 aa9.15□□□□□ -0.95
HDAC6-228ENST00000486227 EFNA4P52798 201 aa9.15□□□□□ -0.95
HDAC6-228ENST00000486227 ATP5G2Q06055 141 aa9.15□□□□□ -0.95
HDAC6-228ENST00000486227 WNT10AQ9GZT5 417 aa9.15□□□□□ -0.95
HDAC6-228ENST00000486227 ATP5G3P48201 142 aa9.14□□□□□ -0.95
HDAC6-228ENST00000486227 TDGF1P3P51864 188 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms