RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 C5orf66Q9H5L9 145 aa13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 EDA2RQ9HAV5 297 aa13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 INS-IGF2F8WCM5 200 aa13.79□□□□□ -0.2
PRPF40A-209ENST00000486100 MT-CO2P00403 227 aa13.79□□□□□ -0.2
PRPF40A-209ENST00000486100 AKAIN1P0CW23 69 aa13.79□□□□□ -0.2
PRPF40A-209ENST00000486100 SURF2Q15527 256 aaPredicted RBP13.79□□□□□ -0.2
PRPF40A-209ENST00000486100 RTBDNQ9BSG5 229 aaPredicted RBP13.79□□□□□ -0.2
PRPF40A-209ENST00000486100 C20orf24Q9BUV8 137 aa13.79□□□□□ -0.2
PRPF40A-209ENST00000486100 C6orf62Q9GZU0 229 aaPredicted RBP13.79□□□□□ -0.2
PRPF40A-209ENST00000486100 HIPK2Q9H2X6 1198 aa13.79□□□□□ -0.2
PRPF40A-209ENST00000486100 C14orf166Q9Y224 244 aaKnown RBP13.79□□□□□ -0.2
PRPF40A-209ENST00000486100 RYR3Q15413 4870 aa13.79□□□□□ -0.2
PRPF40A-209ENST00000486100 DNAH7Q8WXX0 4024 aa13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 NUPL2O15504 423 aaKnown RBP13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 ST8SIA3O43173 380 aa13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 NOL3O60936 208 aaKnown RBP13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 IFNA17P01571 189 aa13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 LYL1P12980 280 aa13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 SNCAP37840 140 aa13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 RELQ04864 619 aaPredicted RBP13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 SPINK9Q5DT21 86 aa13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 RRNAD1Q96FB5 475 aaKnown RBP13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 SLIRPQ9GZT3 109 aaKnown RBP13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 RSL24D1Q9UHA3 163 aaKnown RBP13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 GPR132Q9UNW8 380 aa13.78□□□□□ -0.2
PRPF40A-209ENST00000486100 C15orf62A8K5M9 175 aa13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 H3BMQ9 156 aa13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 ZNF701M0R085 212 aaPredicted RBP13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 GSTZ1O43708 216 aaPredicted RBP13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 CDS2O95674 445 aa13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 LAMTOR1Q6IAA8 161 aa13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 SLC35G3Q8N808 338 aa13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 OR4C16Q8NGL9 310 aa13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 GLYATL2Q8WU03 294 aa13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 PINX1Q96BK5 328 aaKnown RBP13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 ISOC1Q96CN7 298 aa13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 SPAG8Q99932 426 aaPredicted RBP13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 SOSTQ9BQB4 213 aa13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 PDCD10Q9BUL8 212 aa13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 TMEM222Q9H0R3 208 aa13.77□□□□□ -0.21
PRPF40A-209ENST00000486100 IGHV3OR16-8A0A075B7F1 116 aa13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 A0A0G2JRQ6 117 aa13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 TEX13DA0A0J9YY54 714 aaPredicted RBP13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 ANKRD20A5PA0PJZ0 165 aa13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 TSPAN4O14817 238 aa13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 OR5AC1P0C628 307 aa13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 TNFSF8P32971 234 aa13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 ETV6P41212 452 aa13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 FAM219AQ8IW50 185 aa13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 ZNF414Q96IQ9 312 aa13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 PRRT1Q99946 306 aa13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 NXF2Q9GZY0 626 aaKnown RBP13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 NAA60Q9H7X0 242 aa13.76□□□□□ -0.21
PRPF40A-209ENST00000486100 FABP12A6NFH5 140 aa13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 ZNF207O43670 478 aaKnown RBP13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 IGHV3-48P01763 117 aa13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 SUB1P53999 127 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 DHODHQ02127 395 aa13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 PVRIGQ6DKI7 326 aa13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 Q6ZRM9 215 aa13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 OR51S1Q8NGJ8 323 aa13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 RNASE11Q8TAA1 199 aaKnown RBP13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 OR10C1Q96KK4 312 aa13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 RETNQ9HD89 108 aa13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 SMPXQ9UHP9 88 aa13.75□□□□□ -0.21
PRPF40A-209ENST00000486100 CRYM-AS1A6NIL9 109 aa13.74□□□□□ -0.21
PRPF40A-209ENST00000486100 GNG7O60262 68 aa13.74□□□□□ -0.21
PRPF40A-209ENST00000486100 YIF1AO95070 293 aa13.74□□□□□ -0.21
PRPF40A-209ENST00000486100 NPBWR1P48145 328 aa13.74□□□□□ -0.21
PRPF40A-209ENST00000486100 DUSP18Q8NEJ0 188 aa13.74□□□□□ -0.21
PRPF40A-209ENST00000486100 MCFD2Q8NI22 146 aa13.74□□□□□ -0.21
PRPF40A-209ENST00000486100 RBPMSQ93062 196 aaKnown RBP13.74□□□□□ -0.21
PRPF40A-209ENST00000486100 ENY2Q9NPA8 101 aa13.74□□□□□ -0.21
PRPF40A-209ENST00000486100 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.74□□□□□ -0.21
PRPF40A-209ENST00000486100 CORTO00230 105 aa13.73□□□□□ -0.21
PRPF40A-209ENST00000486100 RNASE2P10153 161 aaKnown RBP13.73□□□□□ -0.21
PRPF40A-209ENST00000486100 HOXA1P49639 335 aaPredicted RBP13.73□□□□□ -0.21
PRPF40A-209ENST00000486100 SPCS3P61009 180 aa13.73□□□□□ -0.21
PRPF40A-209ENST00000486100 AARDQ4LEZ3 155 aa13.73□□□□□ -0.21
PRPF40A-209ENST00000486100 SELENOHQ8IZQ5 122 aaKnown RBP13.73□□□□□ -0.21
PRPF40A-209ENST00000486100 OR52E5Q8NH55 327 aa13.73□□□□□ -0.21
PRPF40A-209ENST00000486100 LHFPL5Q8TAF8 219 aa13.73□□□□□ -0.21
PRPF40A-209ENST00000486100 SCGB3A2Q96PL1 93 aa13.73□□□□□ -0.21
PRPF40A-209ENST00000486100 SCP2D1Q9UJQ7 156 aa13.73□□□□□ -0.21
PRPF40A-209ENST00000486100 LOC102724200A0A096LPH7 203 aaPredicted RBP13.72□□□□□ -0.21
PRPF40A-209ENST00000486100 TRAV14DV4A0A0A6YYC5 116 aa13.72□□□□□ -0.21
PRPF40A-209ENST00000486100 IGHV7-4-1A0A0J9YVY3 117 aa13.72□□□□□ -0.21
PRPF40A-209ENST00000486100 CHEK1O14757 476 aa13.72□□□□□ -0.21
PRPF40A-209ENST00000486100 TMEM116Q8NCL8 245 aa13.72□□□□□ -0.21
PRPF40A-209ENST00000486100 FAM110AQ9BQ89 295 aa13.72□□□□□ -0.21
PRPF40A-209ENST00000486100 RHPN1-AS1Q9BWJ2 59 aa13.72□□□□□ -0.21
PRPF40A-209ENST00000486100 GGTLC1Q9BX51 225 aa13.72□□□□□ -0.21
PRPF40A-209ENST00000486100 RBM38Q9H0Z9 239 aaKnown RBP13.72□□□□□ -0.21
PRPF40A-209ENST00000486100 KCNIP3Q9Y2W7 256 aa13.72□□□□□ -0.21
PRPF40A-209ENST00000486100 TMEM56-RWDD3S4R434 201 aa13.72□□□□□ -0.21
PRPF40A-209ENST00000486100 TMEM50AO95807 157 aa13.71□□□□□ -0.21
PRPF40A-209ENST00000486100 BSXQ3C1V8 233 aa13.71□□□□□ -0.21
PRPF40A-209ENST00000486100 TMEM268Q5VZI3 342 aa13.71□□□□□ -0.21
PRPF40A-209ENST00000486100 ZFAND6Q6FIF0 208 aa13.71□□□□□ -0.21
PRPF40A-209ENST00000486100 GPR146Q96CH1 333 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms