RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 DPRXA6NFQ7 191 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 OR4C46A6NHA9 309 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 SHBGP04278 402 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 SERPINA6P08185 405 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 SPOPLQ6IQ16 392 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 LPCAT3Q6P1A2 487 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 Q6ZQT0 140 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 AAED1Q7RTV5 226 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 TRAPPC5Q8IUR0 188 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 TERB2Q8NHR7 220 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 H1FXQ92522 213 aaKnown RBP0.76□□□□□ -2.29
GCFC2-209ENST00000486016 DCUN1D1Q96GG9 259 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 C8orf76Q96K31 380 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 SCGB3A1Q96QR1 104 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 MED9Q9NWA0 146 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 CKLFQ9UBR5 152 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 BRWD1Q9NSI6 2320 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 PCDH15Q96QU1 1955 aa0.76□□□□□ -2.29
GCFC2-209ENST00000486016 HECW2Q9P2P5 1572 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 PLB1Q6P1J6 1458 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 NUP155O75694 1391 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 TRAV9-1A0A075B6T8 112 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 TRAV26-2A0A0B4J265 109 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 FAM236DA0A1B0GTK5 79 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 EXOC1LA0A1B0GW35 172 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 PQLC2LA1A4F0 135 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 BUB1B-PAK6H3BSN5 160 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 KPNA3O00505 521 aaPredicted RBP0.75□□□□□ -2.29
GCFC2-209ENST00000486016 TTRP02766 147 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 HTR1AP08908 422 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 FAM236CP0DP71 79 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 CRYGAP11844 174 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 FKBP2P26885 142 aaKnown RBP0.75□□□□□ -2.29
GCFC2-209ENST00000486016 G6PCP35575 357 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 OMPP47874 163 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 CEBPGP53567 150 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 LSM6P62312 80 aaKnown RBP0.75□□□□□ -2.29
GCFC2-209ENST00000486016 RANP62826 216 aaKnown RBP0.75□□□□□ -2.29
GCFC2-209ENST00000486016 AESQ08117 197 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 C10orf55Q5SWW7 151 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 MIR17HGQ75NE6 70 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 CLVS1Q8IUQ0 354 aaPredicted RBP0.75□□□□□ -2.29
GCFC2-209ENST00000486016 DNAJC9Q8WXX5 260 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 TOMM6Q96B49 74 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 SERPINI1Q99574 410 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 GINS4Q9BRT9 223 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 TMEM147Q9BVK8 224 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 REG4Q9BYZ8 158 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 ULBP3Q9BZM4 244 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 UBAP1Q9NZ09 502 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 TMEM56-RWDD3S4R434 201 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 STRCQ7RTU9 1775 aa0.75□□□□□ -2.29
GCFC2-209ENST00000486016 TOPBP1Q92547 1522 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 CCDC88AQ3V6T2 1871 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 MYO3BQ8WXR4 1341 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 IGKV1D-42A0A075B6H8 117 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 A0A087WUJ7 227 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 RPP14O95059 124 aaKnown RBP0.74□□□□□ -2.29
GCFC2-209ENST00000486016 OR5F1O95221 314 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 CNIH1O95406 144 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 CRYZL1O95825 349 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 IFNA10P01566 189 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 TCRBP04435 133 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 CTSDP07339 412 aaPredicted RBP0.74□□□□□ -2.29
GCFC2-209ENST00000486016 RNASE3P12724 160 aaKnown RBP0.74□□□□□ -2.29
GCFC2-209ENST00000486016 SPI1P17947 270 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 RGS21Q2M5E4 152 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 ZNF826PQ6ZT77 177 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 PPP1R14BQ96C90 147 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.74□□□□□ -2.29
GCFC2-209ENST00000486016 HECW1Q76N89 1606 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 MYOFQ9NZM1 2061 aa0.74□□□□□ -2.29
GCFC2-209ENST00000486016 ROBO3Q96MS0 1386 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 TRAV14DV4A0A0A6YYC5 116 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 A0A0D9SG52 128 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 FUOMA2VDF0 154 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 SMIM9A6NGZ8 99 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 GOLGA6L19H0YKK7 550 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 PIRO00625 290 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 HCRTO43612 131 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 SMIM10L2AP0DMW4 78 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 SMIM10L2BP0DMW5 78 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 CDKN2CP42773 168 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 CDC42P60953 191 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 KHDC3LQ587J8 217 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.73□□□□□ -2.29
GCFC2-209ENST00000486016 DPPA3Q6W0C5 159 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 DEFB128Q7Z7B8 93 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 LINC00471Q8N535 108 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 ZNF565Q8N9K5 539 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 MNS1Q8NEH6 495 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 OR52R1Q8NGF1 315 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 OR4D11Q8NGI4 311 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 OR5A1Q8NGJ0 315 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 AQP3Q92482 292 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 SLC50A1Q9BRV3 221 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 C20orf27Q9GZN8 174 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 DCSTAMPQ9H295 470 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 SLC39A9Q9NUM3 307 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 OR5AC2Q9NZP5 309 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms