RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PINX1Q96BK5 328 aaKnown RBP9.1□□□□□ -0.95
HPS4-214ENST00000485842 RBKSQ9H477 322 aa9.1□□□□□ -0.95
HPS4-214ENST00000485842 ZC4H2Q9NQZ6 224 aa9.1□□□□□ -0.95
HPS4-214ENST00000485842 HSPB7Q9UBY9 170 aa9.1□□□□□ -0.95
HPS4-214ENST00000485842 TRBV7-1A0A0A6YYK4 115 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 INS-IGF2F8WCM5 200 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 K7EIM0 57 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 IFNA21P01568 189 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 SUB1P53999 127 aaKnown RBP eCLIP9.09□□□□□ -0.95
HPS4-214ENST00000485842 SYNJ2BPP57105 145 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 PDLIM3Q53GG5 364 aaPredicted RBP9.09□□□□□ -0.95
HPS4-214ENST00000485842 NRARPQ7Z6K4 114 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 UBAC2Q8NBM4 344 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 ZNF502Q8TBZ5 544 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 VN1R17PQ8TDU5 208 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 ZNF431Q8TF32 576 aaPredicted RBP9.09□□□□□ -0.95
HPS4-214ENST00000485842 GPR61Q9BZJ8 451 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 HIPK2Q9H2X6 1198 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 C21orf62Q9NYP8 219 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 CACFD1Q9UGQ2 172 aa9.09□□□□□ -0.95
HPS4-214ENST00000485842 PITX3O75364 302 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 SAP30O75446 220 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 OR2C1O95371 312 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 MT-CO2P00403 227 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 IGHV3-48P01763 117 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 CLEC3BP05452 202 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 IAPPP10997 89 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 SLC25A6P12236 298 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 BEAN1Q3B7T3 259 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 Q56UQ5 140 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 C9orf66Q5T8R8 295 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 PLET1Q6UQ28 207 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 UXS1Q8NBZ7 420 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 SLC24A4Q8NFF2 622 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 DTD1Q8TEA8 209 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 SCARB1Q8WTV0 552 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 MITD1Q8WV92 249 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 CMYA5Q8N3K9 4069 aa9.08□□□□□ -0.96
HPS4-214ENST00000485842 NOTCH1P46531 2555 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 IGHV3-35A0A0C4DH35 117 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 OR2T8A6NH00 312 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 MPTX1A8MV57 137 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 I3L2K1 104 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 CCSO14618 274 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 GGCTO75223 188 aaKnown RBP9.07□□□□□ -0.96
HPS4-214ENST00000485842 IFNA10P01566 189 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 NPY1RP25929 384 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 HTR2BP41595 481 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 DEFA6Q01524 100 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 KLF5Q13887 457 aaPredicted RBP9.07□□□□□ -0.96
HPS4-214ENST00000485842 TATDN3Q17R31 274 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 C12orf45Q8N5I9 185 aaPredicted RBP9.07□□□□□ -0.96
HPS4-214ENST00000485842 ELOVL1Q9BW60 279 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 MAGT1Q9H0U3 335 aa9.07□□□□□ -0.96
HPS4-214ENST00000485842 FAM25EA8MYX2 175 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 FAM90A26D6RGX4 464 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 INMT-MINDY4F8WBC2 141 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 CORTO00230 105 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 TGOLN2O43493 480 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 MED6O75586 246 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 SCGB1D2O95969 90 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 PRB2P02812 416 aaPredicted RBP9.06□□□□□ -0.96
HPS4-214ENST00000485842 OPRK1P41145 380 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 IAH1Q2TAA2 248 aaPredicted RBP9.06□□□□□ -0.96
HPS4-214ENST00000485842 BSXQ3C1V8 233 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 C2orf83Q53S99 150 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 ACSM6Q6P461 480 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 DUSP18Q8NEJ0 188 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 OR9G4Q8NGQ1 327 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 OR4C12Q96R67 309 aa9.06□□□□□ -0.96
HPS4-214ENST00000485842 F8W735 103 aaPredicted RBP9.05□□□□□ -0.96
HPS4-214ENST00000485842 WRBO00258 174 aa9.05□□□□□ -0.96
HPS4-214ENST00000485842 GNG7O60262 68 aa9.05□□□□□ -0.96
HPS4-214ENST00000485842 IL5P05113 134 aa9.05□□□□□ -0.96
HPS4-214ENST00000485842 SPNP16150 400 aa9.05□□□□□ -0.96
HPS4-214ENST00000485842 MFAP4P55083 255 aa9.05□□□□□ -0.96
HPS4-214ENST00000485842 KPRPQ5T749 579 aaPredicted RBP9.05□□□□□ -0.96
HPS4-214ENST00000485842 HAPLN4Q86UW8 402 aa9.05□□□□□ -0.96
HPS4-214ENST00000485842 ZBTB8BQ8NAP8 495 aaPredicted RBP9.05□□□□□ -0.96
HPS4-214ENST00000485842 BSCL2Q96G97 398 aaPredicted RBP9.05□□□□□ -0.96
HPS4-214ENST00000485842 OR10C1Q96KK4 312 aa9.05□□□□□ -0.96
HPS4-214ENST00000485842 CHRDL1Q9BU40 450 aa9.05□□□□□ -0.96
HPS4-214ENST00000485842 FNDC4Q9H6D8 234 aaPredicted RBP9.05□□□□□ -0.96
HPS4-214ENST00000485842 GPN1Q9HCN4 374 aaPredicted RBP9.05□□□□□ -0.96
HPS4-214ENST00000485842 GSKIPQ9P0R6 139 aa9.05□□□□□ -0.96
HPS4-214ENST00000485842 PAIP2BQ9ULR5 123 aaKnown RBP9.05□□□□□ -0.96
HPS4-214ENST00000485842 RPS10-NUDT3A0A1W2PQS6 291 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 ZNF320A2RRD8 509 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 C5orf51A6NDU8 294 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 SYNGR2O43760 224 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 PRAF2O60831 178 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 NKX2-1P43699 371 aaPredicted RBP9.04□□□□□ -0.96
HPS4-214ENST00000485842 NPBWR1P48145 328 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 INSL3P51460 131 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 KRTAP10-11P60412 298 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 POLR2GP62487 172 aaKnown RBP eCLIP9.04□□□□□ -0.96
HPS4-214ENST00000485842 FAM106AQ4KMX7 169 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 PVRIGQ6DKI7 326 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 SPSB3Q6PJ21 355 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 NOXA1Q86UR1 476 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms