RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 PRR13Q9NZ81 148 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 CACNG5Q9UF02 275 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 UFC1Q9Y3C8 167 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 CENPXA8MT69 81 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 K7EIM0 57 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 NXPH3O95157 252 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 MT-CO2P00403 227 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 SULT1A3P0DMM9 295 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 SULT1A4P0DMN0 295 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 CBLN1P23435 193 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 VAMP1P23763 118 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 CD300EQ496F6 205 aaPredicted RBP9.5□□□□□ -0.89
PTCD1-205ENST00000485746 TM4SF20Q53R12 229 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 UXS1Q8NBZ7 420 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 ZNF114Q8NC26 417 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 DUSP18Q8NEJ0 188 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 TMEM230Q96A57 120 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 GALNT14Q96FL9 552 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 TXN2Q99757 166 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 TUBA4BQ9H853 241 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 HEYLQ9NQ87 328 aaPredicted RBP9.5□□□□□ -0.89
PTCD1-205ENST00000485746 CACFD1Q9UGQ2 172 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 TMEM56-RWDD3S4R434 201 aa9.5□□□□□ -0.89
PTCD1-205ENST00000485746 IZUMO1RA6ND01 250 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 NAP1L6A6NFF2 107 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 GNG7O60262 68 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 YIF1AO95070 293 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 IGHV3-48P01763 117 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 NHLRC4P0CG21 123 aaPredicted RBP9.49□□□□□ -0.89
PTCD1-205ENST00000485746 RELQ04864 619 aaPredicted RBP9.49□□□□□ -0.89
PTCD1-205ENST00000485746 BAK1Q16611 211 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 DEFB114Q30KQ6 69 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 TMEM128Q5BJH2 165 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 UNQ9165/PRO28630Q6UXU0 137 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 Q6ZRM9 215 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 OR52E5Q8NH55 327 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 CACNG8Q8WXS5 425 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 MARC2Q969Z3 335 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 ATP6V0BQ99437 205 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 HIPK2Q9H2X6 1198 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 SELENOKQ9Y6D0 94 aa9.49□□□□□ -0.89
PTCD1-205ENST00000485746 A0A0B4J2A0 478 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 INS-IGF2F8WCM5 200 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 I3L2K1 104 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 CORTO00230 105 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 NDUFA4O00483 81 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 SCGB2A1O75556 95 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 EDN2P20800 178 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 NPBWR1P48145 328 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 CCR6P51684 374 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 ELLP55199 621 aaPredicted RBP9.48□□□□□ -0.89
PTCD1-205ENST00000485746 RBMS2Q15434 407 aaKnown RBP9.48□□□□□ -0.89
PTCD1-205ENST00000485746 ADAMTSL5Q6ZMM2 481 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 RBPMS2Q6ZRY4 209 aaKnown RBP9.48□□□□□ -0.89
PTCD1-205ENST00000485746 LYZL2Q7Z4W2 148 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 CENPSQ8N2Z9 138 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 OR1S1Q8NH92 325 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 CHRDL1Q9BU40 450 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 ZNF436Q9C0F3 470 aaPredicted RBP9.48□□□□□ -0.89
PTCD1-205ENST00000485746 MRPL27Q9P0M9 148 aaKnown RBP9.48□□□□□ -0.89
PTCD1-205ENST00000485746 SHPKQ9UHJ6 478 aa9.48□□□□□ -0.89
PTCD1-205ENST00000485746 RPS10-NUDT3A0A1W2PQS6 291 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 TMEM213A2RRL7 107 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 A8MWP6 167 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 ZNF207O43670 478 aaKnown RBP9.47□□□□□ -0.89
PTCD1-205ENST00000485746 FRMD6-AS1P0C7T7 363 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 RNASE2P10153 161 aaKnown RBP9.47□□□□□ -0.89
PTCD1-205ENST00000485746 OPRK1P41145 380 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 HTR2BP41595 481 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 CD81P60033 236 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 SUPT4H1P63272 117 aaKnown RBP9.47□□□□□ -0.89
PTCD1-205ENST00000485746 SMCO1Q147U7 214 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 C11orf87Q6NUJ2 197 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 BTNL8Q6UX41 500 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 NOXA1Q86UR1 476 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 DNAH3Q8TD57 4116 aa9.47□□□□□ -0.89
PTCD1-205ENST00000485746 IGHV3OR16-8A0A075B7F1 116 aa9.46□□□□□ -0.9
PTCD1-205ENST00000485746 SCAF4O95104 1147 aaKnown RBP9.46□□□□□ -0.9
PTCD1-205ENST00000485746 IFNA10P01566 189 aa9.46□□□□□ -0.9
PTCD1-205ENST00000485746 CTSGP08311 255 aa9.46□□□□□ -0.9
PTCD1-205ENST00000485746 IGHV4-30-4P0DP06 118 aa9.46□□□□□ -0.9
PTCD1-205ENST00000485746 LAMTOR1Q6IAA8 161 aa9.46□□□□□ -0.9
PTCD1-205ENST00000485746 Q8N1Y9 231 aa9.46□□□□□ -0.9
PTCD1-205ENST00000485746 TMEM190Q8WZ59 177 aa9.46□□□□□ -0.9
PTCD1-205ENST00000485746 WDR89Q96FK6 387 aaPredicted RBP9.46□□□□□ -0.9
PTCD1-205ENST00000485746 NEURL2Q9BR09 285 aa9.46□□□□□ -0.9
PTCD1-205ENST00000485746 C7orf50Q9BRJ6 194 aaKnown RBP9.46□□□□□ -0.9
PTCD1-205ENST00000485746 DAZ1Q9NQZ3 744 aaKnown RBP9.46□□□□□ -0.9
PTCD1-205ENST00000485746 MLXQ9UH92 298 aa9.46□□□□□ -0.9
PTCD1-205ENST00000485746 A0A1B0GU03 582 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 DUXBA0A1W2PPF3 345 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 ZNF785A8K8V0 405 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 F8W735 103 aaPredicted RBP9.45□□□□□ -0.9
PTCD1-205ENST00000485746 SFT2D2O95562 160 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 IL7P13232 177 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 FCGR2BP31994 310 aaPredicted RBP9.45□□□□□ -0.9
PTCD1-205ENST00000485746 ADMP35318 185 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 PPP1R1AQ13522 171 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 ANKRD55Q3KP44 614 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 SLC16A13Q7RTY0 426 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms