RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ZNF436Q9C0F3 470 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-227ENST00000485102 UFC1Q9Y3C8 167 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 MFSD2BA6NFX1 497 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 LYRM1O43325 122 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 HPRT1P00492 218 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 DEFA4P12838 97 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 HLA-GP17693 338 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 OR2B8PP59922 312 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 ERVK-16P61578 105 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 DHODHQ02127 395 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 BAK1Q16611 211 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 POU2AF1Q16633 256 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 ZNF585BQ52M93 769 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 OR2B11Q5JQS5 317 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 LGALS9CQ6DKI2 356 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 ZNF818PQ6ZRF7 136 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 PLEKHA2Q9HB19 425 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 CCL28Q9NRJ3 127 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 COMMD9Q9P000 198 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 THYN1Q9P016 225 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 S4R3C0 116 aa9.65□□□□□ -0.86
HDAC6-227ENST00000485102 IGLC7A0M8Q6 106 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 J3QRK9 145 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 PGLYRP1O75594 196 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-227ENST00000485102 SERPINE2P07093 398 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 NQO2P16083 231 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 F2RP25116 425 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 PIGPP57054 158 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 ASAH1Q13510 395 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 STPG3Q8N7X2 389 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 VN1R17PQ8TDU5 208 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 TMEM190Q8WZ59 177 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 FXYD6Q9H0Q3 95 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 GPR132Q9UNW8 380 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 SELENOKQ9Y6D0 94 aa9.64□□□□□ -0.87
HDAC6-227ENST00000485102 TEX13DA0A0J9YY54 714 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-227ENST00000485102 FAM240BA0A1B0GVZ2 78 aa9.63□□□□□ -0.87
HDAC6-227ENST00000485102 GPR183P32249 361 aa9.63□□□□□ -0.87
HDAC6-227ENST00000485102 DEFB135Q30KP9 77 aa9.63□□□□□ -0.87
HDAC6-227ENST00000485102 TMEM128Q5BJH2 165 aa9.63□□□□□ -0.87
HDAC6-227ENST00000485102 THOC7Q6I9Y2 204 aaKnown RBP9.63□□□□□ -0.87
HDAC6-227ENST00000485102 LAMTOR1Q6IAA8 161 aa9.63□□□□□ -0.87
HDAC6-227ENST00000485102 PLET1Q6UQ28 207 aa9.63□□□□□ -0.87
HDAC6-227ENST00000485102 SPAG16Q8N0X2 631 aa9.63□□□□□ -0.87
HDAC6-227ENST00000485102 RPP25LQ8N5L8 163 aaKnown RBP9.63□□□□□ -0.87
HDAC6-227ENST00000485102 OR4D10Q8NGI6 311 aa9.63□□□□□ -0.87
HDAC6-227ENST00000485102 OR13C8Q8NGS7 320 aa9.63□□□□□ -0.87
HDAC6-227ENST00000485102 GALNT14Q96FL9 552 aa9.63□□□□□ -0.87
HDAC6-227ENST00000485102 SDHCQ99643 169 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-227ENST00000485102 DAZ1Q9NQZ3 744 aaKnown RBP9.63□□□□□ -0.87
HDAC6-227ENST00000485102 K7EMT4 169 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 TGOLN2O43493 480 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 NDUFB6O95139 128 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 ODF3L2Q3SX64 289 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 SPSB3Q6PJ21 355 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 SSX9Q7RTT3 188 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 HSD17B13Q7Z5P4 300 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-227ENST00000485102 TBC1D26Q86UD7 250 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 CENPSQ8N2Z9 138 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 ENKURQ8TC29 256 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 MARCH1Q8TCQ1 289 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 PHLDA1Q8WV24 401 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-227ENST00000485102 MAP6D1Q9H9H5 199 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 FKBP11Q9NYL4 201 aa9.62□□□□□ -0.87
HDAC6-227ENST00000485102 VPS13DQ5THJ4 4388 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 C3orf85A0A1B0GTC6 90 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 OR4C46A6NHA9 309 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 NDUFA4O00483 81 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 UPK2O00526 184 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 CYB5BO43169 146 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 RLN1P04808 185 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 REG1AP05451 166 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 PHLDA2Q53GA4 152 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 FAM219AQ8IW50 185 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 OR51H1Q8NH63 302 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 IL22RA2Q969J5 263 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 BSCL2Q96G97 398 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-227ENST00000485102 COMMD5Q9GZQ3 224 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 NAA60Q9H7X0 242 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 HECTD4Q9Y4D8 3996 aa9.61□□□□□ -0.87
HDAC6-227ENST00000485102 DNAH6Q9C0G6 4158 aa9.6□□□□□ -0.87
HDAC6-227ENST00000485102 DUXBA0A1W2PPF3 345 aa9.6□□□□□ -0.87
HDAC6-227ENST00000485102 CRYM-AS1A6NIL9 109 aa9.6□□□□□ -0.87
HDAC6-227ENST00000485102 TNFSF12O43508 249 aa9.6□□□□□ -0.87
HDAC6-227ENST00000485102 CMC4P56277 68 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-227ENST00000485102 TCTAP57738 103 aa9.6□□□□□ -0.87
HDAC6-227ENST00000485102 FAAP20Q6NZ36 180 aa9.6□□□□□ -0.87
HDAC6-227ENST00000485102 GATAD1Q8WUU5 269 aa9.6□□□□□ -0.87
HDAC6-227ENST00000485102 UBQLN2Q9UHD9 624 aa9.6□□□□□ -0.87
HDAC6-227ENST00000485102 TRAV3A0A0B4J244 114 aa9.59□□□□□ -0.87
HDAC6-227ENST00000485102 IGHV3-35A0A0C4DH35 117 aa9.59□□□□□ -0.87
HDAC6-227ENST00000485102 SNAPC5O75971 98 aa9.59□□□□□ -0.87
HDAC6-227ENST00000485102 TRIM16LQ309B1 348 aa9.59□□□□□ -0.87
HDAC6-227ENST00000485102 DMBX1Q8NFW5 382 aa9.59□□□□□ -0.87
HDAC6-227ENST00000485102 RRNAD1Q96FB5 475 aaKnown RBP9.59□□□□□ -0.87
HDAC6-227ENST00000485102 GPHA2Q96T91 129 aa9.59□□□□□ -0.87
HDAC6-227ENST00000485102 RTBDNQ9BSG5 229 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-227ENST00000485102 QTRT1Q9BXR0 403 aaKnown RBP9.59□□□□□ -0.87
HDAC6-227ENST00000485102 LINC00854A0A1B0GVQ3 168 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 MARCH11A6NNE9 402 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms