RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 SCARB1Q8WTV0 552 aa13.58□□□□□ -0.24
SREBF1-213ENST00000485080 FLVCR2Q9UPI3 526 aa13.58□□□□□ -0.24
SREBF1-213ENST00000485080 TMED3Q9Y3Q3 217 aa13.58□□□□□ -0.24
SREBF1-213ENST00000485080 C9orf170A2RU37 121 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 PPP5D1E7EU14 171 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 PITX3O75364 302 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 SAP30O75446 220 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 RNASE2P10153 161 aaKnown RBP13.57□□□□□ -0.24
SREBF1-213ENST00000485080 ARL3P36405 182 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 HOXA1P49639 335 aaPredicted RBP13.57□□□□□ -0.24
SREBF1-213ENST00000485080 SUB1P53999 127 aaKnown RBP eCLIP13.57□□□□□ -0.24
SREBF1-213ENST00000485080 SPINK9Q5DT21 86 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 SPSB3Q6PJ21 355 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 BSCL2Q96G97 398 aaPredicted RBP13.57□□□□□ -0.24
SREBF1-213ENST00000485080 OR4C12Q96R67 309 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 TXN2Q99757 166 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 ENY2Q9NPA8 101 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 GAR1Q9NY12 217 aaKnown RBP13.57□□□□□ -0.24
SREBF1-213ENST00000485080 C21orf62Q9NYP8 219 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 HSPB7Q9UBY9 170 aa13.57□□□□□ -0.24
SREBF1-213ENST00000485080 F8W735 103 aaPredicted RBP13.56□□□□□ -0.24
SREBF1-213ENST00000485080 CORTO00230 105 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 UPK1BO75841 260 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 IGHV3-23P01764 117 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 OR4E1P0C645 316 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 HTR2BP41595 481 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 TNFRSF9Q07011 255 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 DHRS2Q13268 280 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 ASAH1Q13510 395 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 LYG2Q86SG7 212 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 PEMTQ9UBM1 199 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 TBC1D24Q9ULP9 559 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 S4R3C0 116 aa13.56□□□□□ -0.24
SREBF1-213ENST00000485080 TGOLN2O43493 480 aa13.55□□□□□ -0.24
SREBF1-213ENST00000485080 OR2C1O95371 312 aa13.55□□□□□ -0.24
SREBF1-213ENST00000485080 IGLV1-51P01701 117 aa13.55□□□□□ -0.24
SREBF1-213ENST00000485080 TCRBP04435 133 aa13.55□□□□□ -0.24
SREBF1-213ENST00000485080 CSN3P07498 182 aa13.55□□□□□ -0.24
SREBF1-213ENST00000485080 GPR183P32249 361 aa13.55□□□□□ -0.24
SREBF1-213ENST00000485080 FAM106AQ4KMX7 169 aa13.55□□□□□ -0.24
SREBF1-213ENST00000485080 C20orf85Q9H1P6 137 aa13.55□□□□□ -0.24
SREBF1-213ENST00000485080 A8MWP6 167 aa13.54□□□□□ -0.24
SREBF1-213ENST00000485080 FAM90A26D6RGX4 464 aa13.54□□□□□ -0.24
SREBF1-213ENST00000485080 MT-CO2P00403 227 aa13.54□□□□□ -0.24
SREBF1-213ENST00000485080 PRB2P02812 416 aaPredicted RBP13.54□□□□□ -0.24
SREBF1-213ENST00000485080 ANXA7P20073 488 aaKnown RBP13.54□□□□□ -0.24
SREBF1-213ENST00000485080 MFAP4P55083 255 aa13.54□□□□□ -0.24
SREBF1-213ENST00000485080 ATP5IP56385 69 aaPredicted RBP13.54□□□□□ -0.24
SREBF1-213ENST00000485080 MZT2BQ6NZ67 158 aa13.54□□□□□ -0.24
SREBF1-213ENST00000485080 PLET1Q6UQ28 207 aa13.54□□□□□ -0.24
SREBF1-213ENST00000485080 MISP3Q96FF7 219 aa13.54□□□□□ -0.24
SREBF1-213ENST00000485080 ZNF436Q9C0F3 470 aaPredicted RBP13.54□□□□□ -0.24
SREBF1-213ENST00000485080 DNAH9Q9NYC9 4486 aa13.54□□□□□ -0.24
SREBF1-213ENST00000485080 CEBPZOSA8MTT3 80 aa13.53□□□□□ -0.24
SREBF1-213ENST00000485080 K7EIL1 84 aa13.53□□□□□ -0.24
SREBF1-213ENST00000485080 C2orf83Q53S99 150 aa13.53□□□□□ -0.24
SREBF1-213ENST00000485080 COQ8AQ8NI60 647 aa13.53□□□□□ -0.24
SREBF1-213ENST00000485080 MITD1Q8WV92 249 aa13.53□□□□□ -0.24
SREBF1-213ENST00000485080 HEYLQ9NQ87 328 aaPredicted RBP13.53□□□□□ -0.24
SREBF1-213ENST00000485080 FAM240BA0A1B0GVZ2 78 aa13.52□□□□□ -0.25
SREBF1-213ENST00000485080 WI2-2373I1.2A0A1W2PRP0 233 aa13.52□□□□□ -0.25
SREBF1-213ENST00000485080 CTSGP08311 255 aa13.52□□□□□ -0.25
SREBF1-213ENST00000485080 ADMP35318 185 aa13.52□□□□□ -0.25
SREBF1-213ENST00000485080 ELLP55199 621 aaPredicted RBP13.52□□□□□ -0.25
SREBF1-213ENST00000485080 C4orf46Q504U0 113 aa13.52□□□□□ -0.25
SREBF1-213ENST00000485080 GGNBP1Q5YKI7 109 aa13.52□□□□□ -0.25
SREBF1-213ENST00000485080 NOXA1Q86UR1 476 aa13.52□□□□□ -0.25
SREBF1-213ENST00000485080 OR1S1Q8NH92 325 aa13.52□□□□□ -0.25
SREBF1-213ENST00000485080 RNASEH2CQ8TDP1 164 aaKnown RBP13.52□□□□□ -0.25
SREBF1-213ENST00000485080 HIPK2Q9H2X6 1198 aa13.52□□□□□ -0.25
SREBF1-213ENST00000485080 ZNF256Q9Y2P7 627 aaPredicted RBP13.52□□□□□ -0.25
SREBF1-213ENST00000485080 U3KQ87 197 aa13.52□□□□□ -0.25
SREBF1-213ENST00000485080 IGHV3-21A0A0B4J1V1 117 aa13.51□□□□□ -0.25
SREBF1-213ENST00000485080 OR2T8A6NH00 312 aa13.51□□□□□ -0.25
SREBF1-213ENST00000485080 IFITM3Q01628 133 aa13.51□□□□□ -0.25
SREBF1-213ENST00000485080 DCTN2Q13561 401 aaKnown RBP13.51□□□□□ -0.25
SREBF1-213ENST00000485080 ADAMTSL5Q6ZMM2 481 aa13.51□□□□□ -0.25
SREBF1-213ENST00000485080 SLC24A4Q8NFF2 622 aa13.51□□□□□ -0.25
SREBF1-213ENST00000485080 OR2K2Q8NGT1 345 aa13.51□□□□□ -0.25
SREBF1-213ENST00000485080 CHRDL1Q9BU40 450 aa13.51□□□□□ -0.25
SREBF1-213ENST00000485080 NUDT15Q9NV35 164 aa13.51□□□□□ -0.25
SREBF1-213ENST00000485080 TMEM213A2RRL7 107 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 C2orf70A6NJV1 201 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 NDUFA4O00483 81 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 HOXB5P09067 269 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 NPBWR1P48145 328 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 Q56UQ5 140 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 DUSP18Q8NEJ0 188 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 DTD1Q8TEA8 209 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 TMEM170AQ8WVE7 144 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 TMEM190Q8WZ59 177 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 MARC2Q969Z3 335 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 PINX1Q96BK5 328 aaKnown RBP13.5□□□□□ -0.25
SREBF1-213ENST00000485080 RBKSQ9H477 322 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 PALMDQ9NP74 551 aa13.5□□□□□ -0.25
SREBF1-213ENST00000485080 NUPL2O15504 423 aaKnown RBP13.49□□□□□ -0.25
SREBF1-213ENST00000485080 MED6O75586 246 aa13.49□□□□□ -0.25
SREBF1-213ENST00000485080 LY86O95711 162 aa13.49□□□□□ -0.25
SREBF1-213ENST00000485080 H2AFB2P0C5Z0 115 aa13.49□□□□□ -0.25
SREBF1-213ENST00000485080 C8orf88P0DMB2 117 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms