RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 TEX22C9J3V5 150 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 ICAM4Q14773 271 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 MLANAQ16655 118 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 NKX6-2Q9C056 277 aaPredicted RBP13.34□□□□□ -0.27
CTSA-207ENST00000484855 LOC102723971A0A1B0GUV8 181 aa13.33□□□□□ -0.28
CTSA-207ENST00000484855 SEC14L6B5MCN3 397 aa13.33□□□□□ -0.28
CTSA-207ENST00000484855 NPFFO15130 113 aa13.33□□□□□ -0.28
CTSA-207ENST00000484855 CNIH1O95406 144 aa13.33□□□□□ -0.28
CTSA-207ENST00000484855 IFNA1P01562 189 aa13.33□□□□□ -0.28
CTSA-207ENST00000484855 RPL29P47914 159 aaKnown RBP13.33□□□□□ -0.28
CTSA-207ENST00000484855 KHDC3LQ587J8 217 aa13.33□□□□□ -0.28
CTSA-207ENST00000484855 RXFP4Q8TDU9 374 aa13.33□□□□□ -0.28
CTSA-207ENST00000484855 BCL2P10415 239 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 COL8A1P27658 744 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 C5orf64Q2M2E5 130 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 ACY3Q96HD9 319 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 FNDC4Q9H6D8 234 aaPredicted RBP13.32□□□□□ -0.28
CTSA-207ENST00000484855 KMT2BQ9UMN6 2715 aaPredicted RBP13.32□□□□□ -0.28
CTSA-207ENST00000484855 IGKV1OR2-108A0A075B7D4 117 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 CENPVL3A0A0U1RRI6 287 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 A0A1W2PPV4 95 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 HSPB1P04792 205 aaKnown RBP13.32□□□□□ -0.28
CTSA-207ENST00000484855 TMEM11P17152 192 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 EBI3Q14213 229 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 CLEC12BQ2HXU8 276 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 Q8N6K4 173 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 OR2T6Q8NHC8 308 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 ABHD5Q8WTS1 349 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 AJUBAQ96IF1 538 aa13.32□□□□□ -0.28
CTSA-207ENST00000484855 SNAPINO95295 136 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 OR10J1P30954 320 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 BTN1A1Q13410 526 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 C19orf35Q6ZS72 473 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 OR1P1Q8NH06 330 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 MISP3Q96FF7 219 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 SLC45A2Q9UMX9 530 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 NCBP2LA6PVI3 153 aaKnown RBP13.31□□□□□ -0.28
CTSA-207ENST00000484855 SRP19P09132 144 aaKnown RBP13.31□□□□□ -0.28
CTSA-207ENST00000484855 BRS3P32247 399 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 MFAP2P55001 183 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 PRR20EP86478 221 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 PRR20CP86479 221 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 PRR20DP86480 221 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 PRR20BP86481 221 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 PRR20AP86496 221 aa13.31□□□□□ -0.28
CTSA-207ENST00000484855 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.31□□□□□ -0.28
CTSA-207ENST00000484855 SRSF8Q9BRL6 282 aaKnown RBP13.31□□□□□ -0.28
CTSA-207ENST00000484855 F11RQ9Y624 299 aaKnown RBP13.31□□□□□ -0.28
CTSA-207ENST00000484855 ANKRD17O75179 2603 aaKnown RBP13.31□□□□□ -0.28
CTSA-207ENST00000484855 FAM106CPP0CH98 169 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 SLC25A16P16260 332 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 PVRIGQ6DKI7 326 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 ETFRF1Q6IPR1 90 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 IQCF2Q8IXL9 164 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 PIP4P2Q8N4L2 257 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 TMPRSS5Q9H3S3 457 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 FBN2P35556 2912 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 CORTO00230 105 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 MSMBP08118 114 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 PMS2P11Q13670 270 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 FXYD3Q14802 87 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 SOHLH1Q5JUK2 328 aa13.3□□□□□ -0.28
CTSA-207ENST00000484855 RBMS3Q6XE24 437 aaKnown RBP13.3□□□□□ -0.28
CTSA-207ENST00000484855 SVEP1Q4LDE5 3571 aa13.29□□□□□ -0.28
CTSA-207ENST00000484855 IGHV3-48P01763 117 aa13.29□□□□□ -0.28
CTSA-207ENST00000484855 FBP1P09467 338 aa13.29□□□□□ -0.28
CTSA-207ENST00000484855 LINC00869P0C866 280 aa13.29□□□□□ -0.28
CTSA-207ENST00000484855 NPBWR1P48145 328 aa13.29□□□□□ -0.28
CTSA-207ENST00000484855 CEBPGP53567 150 aa13.29□□□□□ -0.28
CTSA-207ENST00000484855 VAX2Q9UIW0 290 aa13.29□□□□□ -0.28
CTSA-207ENST00000484855 CELSR2Q9HCU4 2923 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 IGHV3OR16-10A0A075B7F0 116 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 TRAV40A0A0B4J280 105 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 FAM120AOSQ5T036 256 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 RUSC1-AS1Q66K80 236 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 CYB561D1Q8N8Q1 229 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 NPIPB3Q92617 1050 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 IGHV1-69DA0A0B4J2H0 117 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 IGHV1-69P01742 117 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 KRTAP10-9P60411 292 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 RHOBP62745 196 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 CYP2G1PQ6ZSU1 146 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 SLC35E3Q7Z769 313 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 FAM103A1Q9BTL3 118 aaKnown RBP13.28□□□□□ -0.28
CTSA-207ENST00000484855 MANBALQ9NQG1 85 aa13.28□□□□□ -0.28
CTSA-207ENST00000484855 B4DSR2 109 aa13.27□□□□□ -0.28
CTSA-207ENST00000484855 GATA2P23769 480 aaPredicted RBP13.27□□□□□ -0.28
CTSA-207ENST00000484855 RND2P52198 227 aa13.27□□□□□ -0.28
CTSA-207ENST00000484855 CLRN3Q8NCR9 226 aa13.27□□□□□ -0.28
CTSA-207ENST00000484855 C22orf15Q8WYQ4 148 aa13.27□□□□□ -0.28
CTSA-207ENST00000484855 SLC25A33Q9BSK2 321 aa13.27□□□□□ -0.28
CTSA-207ENST00000484855 C1RLQ9NZP8 487 aa13.27□□□□□ -0.28
CTSA-207ENST00000484855 MRPL36Q9P0J6 103 aaKnown RBP13.27□□□□□ -0.28
CTSA-207ENST00000484855 CHD6Q8TD26 2715 aa13.27□□□□□ -0.29
CTSA-207ENST00000484855 CRYGCP07315 174 aa13.27□□□□□ -0.29
CTSA-207ENST00000484855 STAG3L2P0CL84 134 aa13.27□□□□□ -0.29
CTSA-207ENST00000484855 STAG3L3P0CL85 134 aa13.27□□□□□ -0.29
CTSA-207ENST00000484855 PSMB3P49720 205 aa13.27□□□□□ -0.29
CTSA-207ENST00000484855 ZNF562Q6V9R5 426 aa13.27□□□□□ -0.29
CTSA-207ENST00000484855 THAP8Q8NA92 274 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms