RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 GPX7Q96SL4 187 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-214ENST00000483925 AICDAQ9GZX7 198 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 HSPB8Q9UJY1 196 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 S4R3C0 116 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 IGLV3-12A0A075B6K2 115 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 IGKV1D-37A0A075B6S9 117 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 ZNF860A6NHJ4 632 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 C1orf196B1AJZ1 125 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 HLA-DMBP28068 263 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 S100A11P31949 105 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 EIF5AP63241 154 aaKnown RBP2.77□□□□□ -1.97
PTCD3-214ENST00000483925 LINC00483Q53H64 154 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 SPINK14Q6IE38 97 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 ZNF880Q6PDB4 577 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 ZNF705AQ6ZN79 300 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-214ENST00000483925 PRR15Q8IV56 129 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 OR8I2Q8N0Y5 310 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 SMCR5Q8TEV8 140 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 C1orf54Q8WWF1 131 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 BORCS8Q96FH0 119 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 TEX37Q96LM6 180 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 YPEL2Q96QA6 119 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 SLC25A21Q9BQT8 299 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-214ENST00000483925 TTTY13Q9BZ97 58 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 TMEM133Q9H2Q1 129 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 ASF1BQ9NVP2 202 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 ZNF443Q9Y2A4 671 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-214ENST00000483925 CHD5Q8TDI0 1954 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 LOXHD1Q8IVV2 1947 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 ATAD5Q96QE3 1844 aa2.77□□□□□ -1.97
PTCD3-214ENST00000483925 MED23Q9ULK4 1368 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 IGLV3-16A0A075B6K0 115 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 IGHV3OR16-8A0A075B7F1 116 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 A0A087X0T9 212 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 ARRDC5A6NEK1 342 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 TMEM212A6NML5 194 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 C16orf90A8MZG2 172 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 OVOL1O14753 267 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 WISP3O95389 354 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-214ENST00000483925 IGHV3-7P01780 117 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 UBBP0CG47 229 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 CD24P25063 80 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 KLF3P57682 345 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-214ENST00000483925 ZNF117Q03924 483 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 EIF3IQ13347 325 aaKnown RBP2.76□□□□□ -1.97
PTCD3-214ENST00000483925 MORN2Q502X0 79 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 LINC01554Q52M75 96 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 C1orf140Q5VVS0 124 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 NOXRED1Q6NXP6 359 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 LRRC28Q86X40 367 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-214ENST00000483925 ZNF695Q8IW36 515 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 OR8D4Q8NGM9 314 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 PPTC7Q8NI37 304 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 SCGB3A1Q96QR1 104 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 VPS25Q9BRG1 176 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 YIPF3Q9GZM5 350 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 TRAPPC2LQ9UL33 140 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 TP53TG3Q9ULZ0 132 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 PLA2R1Q13018 1463 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.76□□□□□ -1.97
PTCD3-214ENST00000483925 CDC42BPBQ9Y5S2 1711 aa2.76□□□□□ -1.97
PTCD3-214ENST00000483925 RFX7Q2KHR2 1363 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 A0A0J9YW62 118 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 LOC102725191A0A1B0GVB3 256 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 C19orf71A6NCJ1 209 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 TMEM235A6NFC5 223 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 C5orf58C9J3I9 102 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 K7EP13 123 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 TPST1O60507 370 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 CREBL2O60519 120 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-214ENST00000483925 SCTP09683 121 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 MPC1LP0DKB6 136 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 LGALS3P17931 250 aaKnown RBP2.75□□□□□ -1.97
PTCD3-214ENST00000483925 PSMB8P28062 276 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 CMPK1P30085 196 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 XCL1P47992 114 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 UBE2BP63146 152 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 ZNF141Q15928 474 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-214ENST00000483925 MIR17HGQ75NE6 70 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 HIST3H2BBQ8N257 126 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 LRRC18Q8N456 261 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 OR10P1Q8NGE3 313 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 OR4C16Q8NGL9 310 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 TERB2Q8NHR7 220 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 OR2H1Q9GZK4 316 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 POPDC3Q9HBV1 291 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 OSTCQ9NRP0 149 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 DOCK5Q9H7D0 1870 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 CD109Q6YHK3 1445 aa2.75□□□□□ -1.97
PTCD3-214ENST00000483925 ABCA7Q8IZY2 2146 aa2.74□□□□□ -1.97
PTCD3-214ENST00000483925 NCAPD3P42695 1498 aa2.74□□□□□ -1.97
PTCD3-214ENST00000483925 TRAV5A0A0B4J249 113 aa2.74□□□□□ -1.97
PTCD3-214ENST00000483925 A0A1W2PQD3 144 aa2.74□□□□□ -1.97
PTCD3-214ENST00000483925 H3BPC8 53 aa2.74□□□□□ -1.97
PTCD3-214ENST00000483925 C1QCP02747 245 aa2.74□□□□□ -1.97
PTCD3-214ENST00000483925 MSMBP08118 114 aa2.74□□□□□ -1.97
PTCD3-214ENST00000483925 UCHL1P09936 223 aa2.74□□□□□ -1.97
PTCD3-214ENST00000483925 ZNF660Q6AZW8 331 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms