RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 EXTL2Q9UBQ6 330 aa10.2□□□□□ -0.78
VARS-226ENST00000483275 IGHV3-66A0A0C4DH42 116 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 C15orf62A8K5M9 175 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 MPTX1A8MV57 137 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 NUPL2O15504 423 aaKnown RBP10.19□□□□□ -0.78
VARS-226ENST00000483275 CA1P00915 261 aaPredicted RBP10.19□□□□□ -0.78
VARS-226ENST00000483275 F2RP25116 425 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 RBMS2Q15434 407 aaKnown RBP10.19□□□□□ -0.78
VARS-226ENST00000483275 PHLDA2Q53GA4 152 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 SPINK9Q5DT21 86 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 LEMD1Q68G75 181 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 LGALS9CQ6DKI2 356 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 THOC7Q6I9Y2 204 aaKnown RBP10.19□□□□□ -0.78
VARS-226ENST00000483275 C11orf45Q8TAV5 145 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 BORCS5Q969J3 196 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 MOB3AQ96BX8 217 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 CSTL1Q9H114 145 aa10.19□□□□□ -0.78
VARS-226ENST00000483275 PKHD1P08F94 4074 aa10.18□□□□□ -0.78
VARS-226ENST00000483275 K7EMT4 169 aa10.18□□□□□ -0.78
VARS-226ENST00000483275 SNAPC5O75971 98 aa10.18□□□□□ -0.78
VARS-226ENST00000483275 APOHP02749 345 aaPredicted RBP10.18□□□□□ -0.78
VARS-226ENST00000483275 HSD17B13Q7Z5P4 300 aaPredicted RBP10.18□□□□□ -0.78
VARS-226ENST00000483275 LILRB2Q8N423 598 aa10.18□□□□□ -0.78
VARS-226ENST00000483275 FAM24BQ8N5W8 94 aa10.18□□□□□ -0.78
VARS-226ENST00000483275 ST8SIA2Q92186 375 aa10.18□□□□□ -0.78
VARS-226ENST00000483275 DGCR14Q96DF8 476 aaKnown RBP10.18□□□□□ -0.78
VARS-226ENST00000483275 C6orf62Q9GZU0 229 aaPredicted RBP10.18□□□□□ -0.78
VARS-226ENST00000483275 CCDC59Q9P031 241 aaKnown RBP10.18□□□□□ -0.78
VARS-226ENST00000483275 KIAA1109Q2LD37 5005 aa10.18□□□□□ -0.78
VARS-226ENST00000483275 C15orf61A6NNL5 157 aa10.17□□□□□ -0.78
VARS-226ENST00000483275 I3L2K1 104 aa10.17□□□□□ -0.78
VARS-226ENST00000483275 MT-CO2P00403 227 aa10.17□□□□□ -0.78
VARS-226ENST00000483275 FGF2P09038 288 aa10.17□□□□□ -0.78
VARS-226ENST00000483275 RCVRNP35243 200 aa10.17□□□□□ -0.78
VARS-226ENST00000483275 TSPAN5P62079 268 aa10.17□□□□□ -0.78
VARS-226ENST00000483275 IZUMO4Q1ZYL8 232 aa10.17□□□□□ -0.78
VARS-226ENST00000483275 RNASE12Q5GAN4 147 aaKnown RBP10.17□□□□□ -0.78
VARS-226ENST00000483275 TCF24Q7RTU0 167 aa10.17□□□□□ -0.78
VARS-226ENST00000483275 GPX8Q8TED1 209 aa10.17□□□□□ -0.78
VARS-226ENST00000483275 PINX1Q96BK5 328 aaKnown RBP10.17□□□□□ -0.78
VARS-226ENST00000483275 C11orf68Q9H3H3 251 aaKnown RBP10.17□□□□□ -0.78
VARS-226ENST00000483275 TMEM14BQ9NUH8 114 aa10.17□□□□□ -0.78
VARS-226ENST00000483275 ANAPC10Q9UM13 185 aa10.17□□□□□ -0.78
VARS-226ENST00000483275 H3BMQ9 156 aa10.16□□□□□ -0.78
VARS-226ENST00000483275 NAT1P18440 290 aa10.16□□□□□ -0.78
VARS-226ENST00000483275 HLA-DMAP28067 261 aa10.16□□□□□ -0.78
VARS-226ENST00000483275 RELQ04864 619 aaPredicted RBP10.16□□□□□ -0.78
VARS-226ENST00000483275 FAM90A2PQ658T7 463 aa10.16□□□□□ -0.78
VARS-226ENST00000483275 OR6F1Q8NGZ6 308 aa10.16□□□□□ -0.78
VARS-226ENST00000483275 OR1P1Q8NH06 330 aa10.16□□□□□ -0.78
VARS-226ENST00000483275 DYNC2LI1Q8TCX1 351 aa10.16□□□□□ -0.78
VARS-226ENST00000483275 GATAD1Q8WUU5 269 aa10.16□□□□□ -0.78
VARS-226ENST00000483275 OR10C1Q96KK4 312 aa10.16□□□□□ -0.78
VARS-226ENST00000483275 PRNDQ9UKY0 176 aa10.16□□□□□ -0.78
VARS-226ENST00000483275 GPR31O00270 319 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 IGKV1-39P01597 117 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 IGKV1D-39P04432 117 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 S100GP29377 79 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 HRH1P35367 487 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 MFAP4P55083 255 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 DEFB131AP59861 70 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 DHRS11Q6UWP2 260 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 MRGPRFQ96AM1 343 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 DIRAS2Q96HU8 199 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 TMEM56Q96MV1 263 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 NXF2Q9GZY0 626 aaKnown RBP10.15□□□□□ -0.78
VARS-226ENST00000483275 MS4A6AQ9H2W1 248 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 RABL2AQ9UBK7 228 aaPredicted RBP10.15□□□□□ -0.78
VARS-226ENST00000483275 RABL2BQ9UNT1 228 aa10.15□□□□□ -0.78
VARS-226ENST00000483275 FAT2Q9NYQ8 4349 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 TRAV14DV4A0A0A6YYC5 116 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 IGLL5B9A064 214 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 CTDSP2O14595 271 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 ST8SIA3O43173 380 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 GNG7O60262 68 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 DFFBO76075 338 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 IFNA4P05014 189 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 RPL11P62913 178 aaKnown RBP10.14□□□□□ -0.79
VARS-226ENST00000483275 MRPS10P82664 201 aaKnown RBP10.14□□□□□ -0.79
VARS-226ENST00000483275 IL18Q14116 193 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 LPCAT3Q6P1A2 487 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 TOMM20LQ6UXN7 152 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 TBC1D26Q86UD7 250 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 CMTM1Q8IZ96 169 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 C2CD4CQ8TF44 421 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 ATP6V0BQ99437 205 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 MFFQ9GZY8 342 aa10.14□□□□□ -0.79
VARS-226ENST00000483275 TMEM187Q14656 261 aa10.13□□□□□ -0.79
VARS-226ENST00000483275 RNASE10Q5GAN6 216 aaKnown RBP10.13□□□□□ -0.79
VARS-226ENST00000483275 LYSMD2Q8IV50 215 aa10.13□□□□□ -0.79
VARS-226ENST00000483275 Q8NAQ8 132 aa10.13□□□□□ -0.79
VARS-226ENST00000483275 OR52I2Q8NH67 350 aa10.13□□□□□ -0.79
VARS-226ENST00000483275 MCFD2Q8NI22 146 aa10.13□□□□□ -0.79
VARS-226ENST00000483275 SEC22AQ96IW7 307 aa10.13□□□□□ -0.79
VARS-226ENST00000483275 MIXL1Q9H2W2 232 aa10.13□□□□□ -0.79
VARS-226ENST00000483275 ZFAND3Q9H8U3 227 aa10.13□□□□□ -0.79
VARS-226ENST00000483275 RSL24D1Q9UHA3 163 aaKnown RBP10.13□□□□□ -0.79
VARS-226ENST00000483275 RABAC1Q9UI14 185 aa10.13□□□□□ -0.79
VARS-226ENST00000483275 IGHV4-28A0A0C4DH34 117 aa10.12□□□□□ -0.79
VARS-226ENST00000483275 A0A1B0GU03 582 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms