RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 GUCA2BQ16661 112 aa10.5□□□□□ -0.73
VARS-225ENST00000482996 IZUMO4Q1ZYL8 232 aa10.5□□□□□ -0.73
VARS-225ENST00000482996 Q56UQ5 140 aa10.5□□□□□ -0.73
VARS-225ENST00000482996 SLC35G3Q8N808 338 aa10.5□□□□□ -0.73
VARS-225ENST00000482996 OR51S1Q8NGJ8 323 aa10.5□□□□□ -0.73
VARS-225ENST00000482996 SCARB1Q8WTV0 552 aa10.5□□□□□ -0.73
VARS-225ENST00000482996 SCGB3A2Q96PL1 93 aa10.5□□□□□ -0.73
VARS-225ENST00000482996 NAA60Q9H7X0 242 aa10.5□□□□□ -0.73
VARS-225ENST00000482996 GAR1Q9NY12 217 aaKnown RBP10.5□□□□□ -0.73
VARS-225ENST00000482996 HUWE1Q7Z6Z7 4374 aaKnown RBP10.49□□□□□ -0.73
VARS-225ENST00000482996 A0A0B4J293 547 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 IGHV3-35A0A0C4DH35 117 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 K7EIM0 57 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 IFNA17P01571 189 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 P0C879 139 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 SNCAP37840 140 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 CD81P60033 236 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 IFITM3Q01628 133 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 DHODHQ02127 395 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 KLF9Q13886 244 aaPredicted RBP10.49□□□□□ -0.73
VARS-225ENST00000482996 TM4SF20Q53R12 229 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 UBAC2Q8NBM4 344 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 UXS1Q8NBZ7 420 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 ZNF114Q8NC26 417 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 CACNG8Q8WXS5 425 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 MISP3Q96FF7 219 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 RTBDNQ9BSG5 229 aaPredicted RBP10.49□□□□□ -0.73
VARS-225ENST00000482996 ZNF436Q9C0F3 470 aaPredicted RBP10.49□□□□□ -0.73
VARS-225ENST00000482996 TMEM222Q9H0R3 208 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 ENY2Q9NPA8 101 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 C19orf73Q9NVV2 129 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 GPR132Q9UNW8 380 aa10.49□□□□□ -0.73
VARS-225ENST00000482996 ZNF785A8K8V0 405 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 ST8SIA3O43173 380 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 CDS2O95674 445 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 OR5AC1P0C628 307 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 EDN2P20800 178 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 MFAP4P55083 255 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 SPINK9Q5DT21 86 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 UNQ9165/PRO28630Q6UXU0 137 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 FAM219AQ8IW50 185 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 TMEM190Q8WZ59 177 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 RCHY1Q96PM5 261 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 NEURL2Q9BR09 285 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 C5orf66Q9H5L9 145 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 MRPL27Q9P0M9 148 aaKnown RBP10.48□□□□□ -0.73
VARS-225ENST00000482996 TBC1D24Q9ULP9 559 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 NBEAL2Q6ZNJ1 2754 aa10.48□□□□□ -0.73
VARS-225ENST00000482996 CRYM-AS1A6NIL9 109 aa10.47□□□□□ -0.73
VARS-225ENST00000482996 INS-IGF2F8WCM5 200 aa10.47□□□□□ -0.73
VARS-225ENST00000482996 NDUFA4O00483 81 aa10.47□□□□□ -0.73
VARS-225ENST00000482996 NUPL2O15504 423 aaKnown RBP10.47□□□□□ -0.73
VARS-225ENST00000482996 HOXA1P49639 335 aaPredicted RBP10.47□□□□□ -0.73
VARS-225ENST00000482996 SUB1P53999 127 aaKnown RBP eCLIP10.47□□□□□ -0.73
VARS-225ENST00000482996 BTNL8Q6UX41 500 aa10.47□□□□□ -0.73
VARS-225ENST00000482996 GLYATL2Q8WU03 294 aa10.47□□□□□ -0.73
VARS-225ENST00000482996 RBPMSQ93062 196 aaKnown RBP10.47□□□□□ -0.73
VARS-225ENST00000482996 WDR89Q96FK6 387 aaPredicted RBP10.47□□□□□ -0.73
VARS-225ENST00000482996 TXN2Q99757 166 aa10.47□□□□□ -0.73
VARS-225ENST00000482996 CHRDL1Q9BU40 450 aa10.47□□□□□ -0.73
VARS-225ENST00000482996 MLXQ9UH92 298 aa10.47□□□□□ -0.73
VARS-225ENST00000482996 KCNIP3Q9Y2W7 256 aa10.47□□□□□ -0.73
VARS-225ENST00000482996 TRAV25A0A0B4J276 109 aa10.46□□□□□ -0.73
VARS-225ENST00000482996 F8W735 103 aaPredicted RBP10.46□□□□□ -0.73
VARS-225ENST00000482996 I3L2K1 104 aa10.46□□□□□ -0.73
VARS-225ENST00000482996 PLA2G10O15496 165 aa10.46□□□□□ -0.73
VARS-225ENST00000482996 MT-CO2P00403 227 aa10.46□□□□□ -0.73
VARS-225ENST00000482996 C8orf88P0DMB2 117 aa10.46□□□□□ -0.73
VARS-225ENST00000482996 FCGR2BP31994 310 aaPredicted RBP10.46□□□□□ -0.73
VARS-225ENST00000482996 RELQ04864 619 aaPredicted RBP10.46□□□□□ -0.73
VARS-225ENST00000482996 RBMS2Q15434 407 aaKnown RBP10.46□□□□□ -0.73
VARS-225ENST00000482996 ANKRD55Q3KP44 614 aa10.46□□□□□ -0.73
VARS-225ENST00000482996 RBPMS2Q6ZRY4 209 aaKnown RBP10.46□□□□□ -0.73
VARS-225ENST00000482996 SLC16A13Q7RTY0 426 aa10.46□□□□□ -0.73
VARS-225ENST00000482996 NRARPQ7Z6K4 114 aa10.46□□□□□ -0.73
VARS-225ENST00000482996 TMEM61Q8N0U2 210 aa10.46□□□□□ -0.73
VARS-225ENST00000482996 CENPSQ8N2Z9 138 aa10.46□□□□□ -0.73
VARS-225ENST00000482996 PINX1Q96BK5 328 aaKnown RBP10.46□□□□□ -0.73
VARS-225ENST00000482996 C20orf24Q9BUV8 137 aa10.46□□□□□ -0.73
VARS-225ENST00000482996 DAZ1Q9NQZ3 744 aaKnown RBP10.46□□□□□ -0.73
VARS-225ENST00000482996 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.46□□□□□ -0.73
VARS-225ENST00000482996 A0A0G2JRQ6 117 aa10.45□□□□□ -0.74
VARS-225ENST00000482996 CTSGP08311 255 aa10.45□□□□□ -0.74
VARS-225ENST00000482996 CD7P09564 240 aa10.45□□□□□ -0.74
VARS-225ENST00000482996 ADMP35318 185 aa10.45□□□□□ -0.74
VARS-225ENST00000482996 NPBWR1P48145 328 aa10.45□□□□□ -0.74
VARS-225ENST00000482996 SPCS3P61009 180 aa10.45□□□□□ -0.74
VARS-225ENST00000482996 TMEM268Q5VZI3 342 aa10.45□□□□□ -0.74
VARS-225ENST00000482996 SELENOHQ8IZQ5 122 aaKnown RBP10.45□□□□□ -0.74
VARS-225ENST00000482996 OR52B4Q8NGK2 314 aa10.45□□□□□ -0.74
VARS-225ENST00000482996 LHFPL5Q8TAF8 219 aa10.45□□□□□ -0.74
VARS-225ENST00000482996 TM2D3Q9BRN9 247 aa10.45□□□□□ -0.74
VARS-225ENST00000482996 SELENOKQ9Y6D0 94 aa10.45□□□□□ -0.74
VARS-225ENST00000482996 OR11H12B2RN74 326 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 K7EMT4 169 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 CORTO00230 105 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 GNG7O60262 68 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 SCAF4O95104 1147 aaKnown RBP10.44□□□□□ -0.74
VARS-225ENST00000482996 OXA1LQ15070 435 aa10.44□□□□□ -0.74
VARS-225ENST00000482996 HAGHQ16775 308 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms