RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 OR10W1Q8NGF6 305 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 TPSG1Q9NRR2 321 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 CXorf1O96002 111 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 STAG3L2P0CL84 134 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 STAG3L3P0CL85 134 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 ATP5G3P48201 142 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 COA6Q5JTJ3 125 aaKnown RBP11.69□□□□□ -0.54
CHD3-211ENST00000481999 CDPF1Q6NVV7 123 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 MOB3BQ86TA1 216 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 LURAP1LQ8IV03 231 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 HARBI1Q96MB7 349 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 NPVFQ9HCQ7 196 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 NDUFB4O95168 129 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 PPOXP50336 477 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 LCN2P80188 198 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 OR1P1Q8NH06 330 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 ACY3Q96HD9 319 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 ADTRPQ96IZ2 230 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 BTF3L4Q96K17 158 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 TMEM14BQ9NUH8 114 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 FOXA2Q9Y261 457 aaPredicted RBP11.68□□□□□ -0.54
CHD3-211ENST00000481999 LSM4Q9Y4Z0 139 aaKnown RBP11.68□□□□□ -0.54
CHD3-211ENST00000481999 TRBV23-1A0A0A0MS06 115 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 ARL14EPLP0DKL9 152 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 HSPE1P61604 102 aaKnown RBP11.68□□□□□ -0.54
CHD3-211ENST00000481999 LDLRAD2Q5SZI1 272 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 MIC13Q5XKP0 118 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 ST6GALNAC6Q969X2 333 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 PRDM13Q9H4Q3 707 aa11.68□□□□□ -0.54
CHD3-211ENST00000481999 PPIAL4CA0A0B4J2A2 164 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 A0A1W2PRD5 423 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 A0A1W2PRF3 423 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 A0A1W2PRM7 423 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 RD3LP0DJH9 198 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 APELAP0DMC3 54 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 PPIAL4GP0DN37 164 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 NPY1RP25929 384 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 CNTFRP26992 372 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 RTL8BQ17RB0 113 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 CLEC12BQ2HXU8 276 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 ACTL10Q5JWF8 245 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 SLC24A4Q8NFF2 622 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 OR5T1Q8NG75 326 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 RAB1BQ9H0U4 201 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 TMEM133Q9H2Q1 129 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 ENY2Q9NPA8 101 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 ONECUT1Q9UBC0 465 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 OR51B2Q9Y5P1 312 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 IGHV2-26A0A0B4J1V2 119 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 XKRY2A2RUG3 117 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 CHRNA7P36544 502 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 MLANAQ16655 118 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 IMMP2LQ96T52 175 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 NABP2Q9BQ15 211 aa11.67□□□□□ -0.54
CHD3-211ENST00000481999 GATCO43716 136 aaKnown RBP11.66□□□□□ -0.54
CHD3-211ENST00000481999 ARF6P62330 175 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 RAB31Q13636 194 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 C9orf152Q5JTZ5 239 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 TEPPQ6URK8 271 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 OR5AN1Q8NGI8 311 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 RNASEH2CQ8TDP1 164 aaKnown RBP11.66□□□□□ -0.54
CHD3-211ENST00000481999 IL6RP08887 468 aaPredicted RBP11.66□□□□□ -0.54
CHD3-211ENST00000481999 KLRD1Q13241 179 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 TMEM30BQ3MIR4 351 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 OR9G1Q8NH87 305 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 SSMEM1Q8WWF3 244 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 C1orf159Q96HA4 380 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 DERL1Q9BUN8 251 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 NBPF19A0A087WUL8 3843 aa11.66□□□□□ -0.54
CHD3-211ENST00000481999 ENSAO43768 121 aaKnown RBP11.65□□□□□ -0.54
CHD3-211ENST00000481999 CA2P00918 260 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 PDLIM4P50479 330 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 POU2AF1Q16633 256 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 ARSJQ5FYB0 599 aaPredicted RBP11.65□□□□□ -0.54
CHD3-211ENST00000481999 C19orf35Q6ZS72 473 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 PNKDQ8N490 385 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 OR5R1Q8NH85 324 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 FUT9Q9Y231 359 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 UPK2O00526 184 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 IGHV3-48P01763 117 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 AMBPP02760 352 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 RHOBP62745 196 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 GAMTQ14353 236 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 FAM78BQ5VT40 261 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 TGIF2LXQ8IUE1 241 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 FLYWCH2Q96CP2 140 aaKnown RBP11.65□□□□□ -0.54
CHD3-211ENST00000481999 CHODLQ9H9P2 273 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 PRNDQ9UKY0 176 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 ZANQ9Y493 2812 aa11.65□□□□□ -0.54
CHD3-211ENST00000481999 TEX50A0A1B0GTY4 177 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 FNDC10F2Z333 226 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 SLC25A17O43808 307 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 MT-CO2P00403 227 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 FOSL1P15407 271 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 CD24P25063 80 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 RPL29P47914 159 aaKnown RBP11.64□□□□□ -0.55
CHD3-211ENST00000481999 FOXL1Q12952 345 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 STPG3Q8N7X2 389 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 OR8B3Q8NGG8 313 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 TMEM37Q8WXS4 190 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms