RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 KLHDC2Q9Y2U9 406 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 M0R2P5 195 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 SYNJ2BPP57105 145 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 ZIC1Q15915 447 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 ZNF525Q8N782 197 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 SLC50A1Q9BRV3 221 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 POLR2AP24928 1970 aaKnown RBP9.75□□□□□ -0.85
TRIM27-205ENST00000481474 EPOPA6NHQ4 379 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 PAX8Q06710 450 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 SLC22A18ASQ8N1D0 253 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 SCRT1Q9BWW7 348 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 ZNF79Q15937 498 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 FER1L6-AS1Q8NA97 138 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 RARRES2Q99969 163 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 PPP1R3EQ9H7J1 279 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE12BA1L429 117 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE12JA6NER3 117 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.75□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE7O76087 117 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 CXCL10P02778 98 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE12FP0CL80 117 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE12GP0CL81 117 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE12IP0CL82 117 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 ID3Q02535 119 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE1Q13065 139 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE4Q13068 117 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE5Q13069 117 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 KLF5Q13887 457 aaPredicted RBP9.75□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE13Q4V321 117 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 MCM3APO60318 1980 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 TNCP24821 2201 aa9.75□□□□□ -0.85
TRIM27-205ENST00000481474 TRAV8-1A0A0A6YYK1 113 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 SMIM18P0DKX4 95 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 SPSB3Q6PJ21 355 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 UQCR10Q9UDW1 63 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 DOCK8Q8NF50 2099 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 A0A087WWL8 130 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 CGAP01215 116 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 FOLR2P14207 255 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 RIMKLAQ8IXN7 391 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 TMEM52Q8NDY8 209 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 SMIM4Q8WVI0 70 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 RSPO3Q9BXY4 272 aaPredicted RBP9.74□□□□□ -0.85
TRIM27-205ENST00000481474 KIF13AQ9H1H9 1805 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 LINC00596Q86U02 117 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 NIT1Q86X76 327 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 C1QTNF4Q9BXJ3 329 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 FAM186AA6NE01 2351 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE2EQ4V326 116 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 SIGLEC15Q6ZMC9 328 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 VN1R4Q7Z5H5 301 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 APCDD1LQ8NCL9 501 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 ATP6V0BQ99437 205 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE2DQ9UEU5 116 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 FAM57AQ8TBR7 257 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 ZNF721Q8TF20 911 aa9.74□□□□□ -0.85
TRIM27-205ENST00000481474 RCC1LQ96I51 464 aaKnown RBP9.74□□□□□ -0.85
TRIM27-205ENST00000481474 IGKV2-40A0A087WW87 121 aaPredicted RBP9.73□□□□□ -0.85
TRIM27-205ENST00000481474 TIAF1O95411 115 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 IGKV2D-40P01614 121 aaPredicted RBP9.73□□□□□ -0.85
TRIM27-205ENST00000481474 RFPL3SP0C7P2 107 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 IGFBP2P18065 325 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 CENPWQ5EE01 88 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 C1orf43Q9BWL3 253 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 SURF2Q15527 256 aaPredicted RBP9.73□□□□□ -0.85
TRIM27-205ENST00000481474 ECM29Q5VYK3 1845 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 PKDREJQ9NTG1 2253 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 TOPAZ1Q8N9V7 1692 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 A6NNC1 897 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 NBEAP1P0C6P0 100 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 PAX1P15863 534 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 COQ2Q96H96 371 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 FOXD3Q9UJU5 478 aaPredicted RBP9.73□□□□□ -0.85
TRIM27-205ENST00000481474 DOCK6Q96HP0 2047 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 CECR9P0C854 216 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 PEBP1P30086 187 aaKnown RBP9.73□□□□□ -0.85
TRIM27-205ENST00000481474 MUC4Q99102 2169 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 SPATA31D1Q6ZQQ2 1576 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 IFNL4K9M1U5 179 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 RS1O15537 224 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 C1QAP02745 245 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 SLIT3O75094 1523 aa9.73□□□□□ -0.85
TRIM27-205ENST00000481474 HSPE1P61604 102 aaKnown RBP9.72□□□□□ -0.85
TRIM27-205ENST00000481474 NALCNQ8IZF0 1738 aa9.72□□□□□ -0.85
TRIM27-205ENST00000481474 DUSP14O95147 198 aaKnown RBP9.72□□□□□ -0.85
TRIM27-205ENST00000481474 CXCL3P19876 107 aa9.72□□□□□ -0.85
TRIM27-205ENST00000481474 NHP2Q9NX24 153 aaKnown RBP9.72□□□□□ -0.85
TRIM27-205ENST00000481474 TRAV8-3A0A0A6YYJ7 113 aa9.72□□□□□ -0.85
TRIM27-205ENST00000481474 IGKV1D-12P01611 117 aa9.72□□□□□ -0.85
TRIM27-205ENST00000481474 SMIM6P0DI80 62 aa9.72□□□□□ -0.85
TRIM27-205ENST00000481474 RPL36AP83881 106 aaKnown RBP9.72□□□□□ -0.85
TRIM27-205ENST00000481474 MRPL14Q6P1L8 145 aaKnown RBP9.72□□□□□ -0.85
TRIM27-205ENST00000481474 RPL36ALQ969Q0 106 aaKnown RBP9.72□□□□□ -0.85
TRIM27-205ENST00000481474 PEF1Q9UBV8 284 aaKnown RBP9.72□□□□□ -0.85
TRIM27-205ENST00000481474 DLG5Q8TDM6 1919 aa9.72□□□□□ -0.85
TRIM27-205ENST00000481474 TNFRSF6BO95407 300 aa9.72□□□□□ -0.85
TRIM27-205ENST00000481474 GAGE6Q13070 117 aa9.72□□□□□ -0.85
TRIM27-205ENST00000481474 SSBP4Q9BWG4 385 aaPredicted RBP9.72□□□□□ -0.85
TRIM27-205ENST00000481474 MTFP1Q9UDX5 166 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms