RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 SCGB2A1O75556 95 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 MT-CO2P00403 227 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 CD74P04233 296 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 P0C879 139 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 PGAM2P15259 253 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 AKR1C2P52895 323 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 SUB1P53999 127 aaKnown RBP eCLIP9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 TAS2R19P59542 299 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 PVRIGQ6DKI7 326 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 FAM219AQ8IW50 185 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 STPG3Q8N7X2 389 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 SLC35G3Q8N808 338 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 TMEM116Q8NCL8 245 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 EXTL2Q9UBQ6 330 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 KLK11Q9UBX7 282 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 TRAV14DV4A0A0A6YYC5 116 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 TRAV2A0A0B4J234 112 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 C3orf85A0A1B0GTC6 90 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 GABARAPH6UMI1 98 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 CHEK1O14757 476 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 SPRY2O43597 315 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 CD3DP04234 171 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 CTSDP07339 412 aaPredicted RBP9□□□□□ -0.97
SQSTM1-207ENST00000481335 UCP1P25874 307 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 SNCAP37840 140 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 SURF2Q15527 256 aaPredicted RBP9□□□□□ -0.97
SQSTM1-207ENST00000481335 GPR107Q5VW38 600 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 TMEM217Q8N7C4 229 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 TMEM229BQ8NBD8 167 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 DUSP18Q8NEJ0 188 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 OR52I2Q8NH67 350 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 TERB2Q8NHR7 220 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 TP53RKQ96S44 253 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 RHPN1-AS1Q9BWJ2 59 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 COPZ2Q9P299 210 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 SELENOKQ9Y6D0 94 aa9□□□□□ -0.97
SQSTM1-207ENST00000481335 NUPR2A6NF83 97 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 YIF1AO95070 293 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 IGKV1-5P01602 117 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 SMIM18P0DKX4 95 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 PAFAH1B2P68402 229 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 MEF2DQ14814 521 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 AARDQ4LEZ3 155 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 ZNF600Q6ZNG1 722 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 PINX1Q96BK5 328 aaKnown RBP8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 RNF183Q96D59 192 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 RRNAD1Q96FB5 475 aaKnown RBP8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 ZNF414Q96IQ9 312 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 RNF2Q99496 336 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 TMEM231Q9H6L2 316 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 MAP6D1Q9H9H5 199 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 CACFD1Q9UGQ2 172 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 UBQLN2Q9UHD9 624 aa8.99□□□□□ -0.97
SQSTM1-207ENST00000481335 PLECQ15149 4684 aaKnown RBP8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 A0A0B4J293 547 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 ST8SIA3O43173 380 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 DFFBO76075 338 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 RAB3DO95716 219 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 IFNA17P01571 189 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 RPL5P46777 297 aaKnown RBP8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 PPP5CP53041 499 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 TRIM16LQ309B1 348 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 DEFB135Q30KP9 77 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 FAM90A2PQ658T7 463 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 STEAP1BQ6NZ63 245 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 LYG2Q86SG7 212 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 OR52E5Q8NH55 327 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 GATAD1Q8WUU5 269 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 ABHD1Q96SE0 405 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 BCL7BQ9BQE9 202 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 MRPS26Q9BYN8 205 aaKnown RBP8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 NAA50Q9GZZ1 169 aaKnown RBP8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 VSIRQ9H7M9 311 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 ENY2Q9NPA8 101 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 ALMS1Q8TCU4 4167 aa8.98□□□□□ -0.97
SQSTM1-207ENST00000481335 IGHV3OR16-8A0A075B7F1 116 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 CTDSPLO15194 276 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 ZNF207O43670 478 aaKnown RBP8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 CDS2O95674 445 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 PI3P19957 117 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 HOXA1P49639 335 aaPredicted RBP8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 BSXQ3C1V8 233 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 SCGB2B2Q4G0G5 96 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 TOMM20LQ6UXN7 152 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 GPR141Q7Z602 305 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 OR13C8Q8NGS7 320 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 SMIM4Q8WVI0 70 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 TMEM222Q9H0R3 208 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 C14orf166Q9Y224 244 aaKnown RBP8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 BIRC6Q9NR09 4857 aa8.97□□□□□ -0.97
SQSTM1-207ENST00000481335 TRAV30A0A087WSZ9 112 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 A0A0J9YWU9 116 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 RPS10-NUDT3A0A1W2PQS6 291 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 A0A1W2PS18 150 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 DISC1C4P0D8 188 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 RGS5O15539 181 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 CLN5O75503 358 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 TMEM50AO95807 157 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 RNASE2P10153 161 aaKnown RBP8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 SPCS3P61009 180 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms