RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 UBE2E1P51965 193 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 GTF2A1P52655 376 aaPredicted RBP2.99□□□□□ -1.93
UPF3A-207ENST00000481131 TNFAIP6P98066 277 aaPredicted RBP2.99□□□□□ -1.93
UPF3A-207ENST00000481131 ST3GAL4Q11206 333 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 PRDX4Q13162 271 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 OR8G1Q15617 311 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 OR8B8Q15620 311 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 KRTAP13-3Q3SY46 172 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 BCL2L15Q5TBC7 163 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 SPNS3Q6ZMD2 512 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 ZNF826PQ6ZT77 177 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 ACBD7Q8N6N7 88 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 OR8G5Q8NG78 346 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 OR51A4Q8NGJ6 313 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 OR5L1Q8NGL2 311 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 OR2T27Q8NH04 317 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 C10orf105Q8TEF2 133 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 ASB17Q8WXJ9 295 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 UBE2E2Q96LR5 201 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 CNBD2Q96M20 576 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 C18orf15Q96N68 181 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 OR2V2Q96R30 315 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 MROQ9BYG7 248 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 BPESC1Q9GZL8 116 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 RAB1BQ9H0U4 201 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 METTL17Q9H7H0 456 aaPredicted RBP2.99□□□□□ -1.93
UPF3A-207ENST00000481131 GPR84Q9NQS5 396 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 C8orf4Q9NR00 106 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 CYTL1Q9NRR1 136 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 UBAP1Q9NZ09 502 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 OR52A1Q9UKL2 312 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 R4GMQ9 66 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 SONP18583 2426 aaKnown RBP2.99□□□□□ -1.93
UPF3A-207ENST00000481131 NSD1Q96L73 2696 aaPredicted RBP2.98□□□□□ -1.93
UPF3A-207ENST00000481131 CSPG4Q6UVK1 2322 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 TRAV6A0A075B6T7 132 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 IGHV3OR15-7A0A075B7D8 119 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 IGHV3-72A0A0B4J1Y9 119 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 OR4C45A6NMZ5 311 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 COLCA2A8K830 154 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 H0YJX3 145 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 BET1O15155 118 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 DHRS3O75911 302 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 FADS2O95864 444 aaKnown RBP2.98□□□□□ -1.93
UPF3A-207ENST00000481131 CRYGCP07315 174 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 PIPP12273 146 aaPredicted RBP2.98□□□□□ -1.93
UPF3A-207ENST00000481131 CD99P14209 185 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 PRKACAP17612 351 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 HTR1DP28221 377 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 TALDO1P37837 337 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 MAP2K4P45985 399 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 TMED1Q13445 227 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 INSL4Q14641 139 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 DEGS2Q6QHC5 323 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 ASCL4Q6XD76 172 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 ZNF645Q8N7E2 425 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 OR13G1Q8NGZ3 307 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 CLDND2Q8NHS1 167 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 BAALCQ8WXS3 180 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 CCL17Q92583 94 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 ADAT3Q96EY9 351 aaPredicted RBP2.98□□□□□ -1.93
UPF3A-207ENST00000481131 KCNS1Q96KK3 526 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 FAM19A4Q96LR4 140 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 Q96MT0 163 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 SPACA5Q96QH8 159 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 SPIN2AQ99865 258 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 SPIN2BQ9BPZ2 258 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 PDCD1LG2Q9BQ51 273 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 REG4Q9BYZ8 158 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 VCX3BQ9H321 246 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 TMEM100Q9NV29 134 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 FKBP14Q9NWM8 211 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 LSM2Q9Y333 95 aaKnown RBP2.98□□□□□ -1.93
UPF3A-207ENST00000481131 HSPE1-MOB4S4R3N1 261 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 V9GYS6 101 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 ZFHX3Q15911 3703 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 CUBNO60494 3623 aa2.98□□□□□ -1.93
UPF3A-207ENST00000481131 FN1P02751 2386 aaKnown RBP2.97□□□□□ -1.93
UPF3A-207ENST00000481131 ANK3Q12955 4377 aaKnown RBP2.97□□□□□ -1.93
UPF3A-207ENST00000481131 IGKV1-9A0A0C4DH69 117 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 ISPDA4D126 451 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 EFCAB10A6NFE3 127 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 CLDN25C9JDP6 229 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 ZNF701M0R085 212 aaPredicted RBP2.97□□□□□ -1.93
UPF3A-207ENST00000481131 RTL8CO15255 209 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 SYNGR1O43759 233 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 GMDSO60547 372 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 SULT1C4O75897 302 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 APOC1P02654 83 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 CDK1P06493 297 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 SLC25A16P16260 332 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 MYL12AP19105 171 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 CCL1P22362 96 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 CRHBPP24387 322 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 CD200P41217 278 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 HSPA13P48723 471 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 SRP9P49458 86 aaKnown RBP2.97□□□□□ -1.93
UPF3A-207ENST00000481131 OR2B8PP59922 312 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 SLC35A2P78381 396 aa2.97□□□□□ -1.93
UPF3A-207ENST00000481131 CDK5R1Q15078 307 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms