RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 ZNF345Q14585 488 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 MMD2Q8IY49 270 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 TMEM167AQ8TBQ9 72 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 C4orf3Q8WVX3 66 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 DCUN1D4Q92564 292 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 COMMD5Q9GZQ3 224 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 MFFQ9GZY8 342 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 ZC4H2Q9NQZ6 224 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 HSPB7Q9UBY9 170 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 C15orf61A6NNL5 157 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 TEX22C9J3V5 150 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 BOLA2-SMG1P6H3BVE0 249 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 CCL24O00175 119 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 TAAR5O14804 337 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 ARPC5O15511 151 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 IGHV3-11P01762 117 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 IL6RP08887 468 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-213ENST00000481019 DEFA6Q01524 100 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 PDLIM3Q53GG5 364 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-213ENST00000481019 Q6ZRM9 215 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 HSD17B13Q7Z5P4 300 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-213ENST00000481019 OR1L8Q8NGR8 309 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 SRSF12Q8WXF0 261 aaKnown RBP9.47□□□□□ -0.89
PTPRF-213ENST00000481019 SMIM8Q96KF7 97 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 RNF126Q9BV68 326 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 MBD2Q9UBB5 411 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 TNFSF18Q9UNG2 199 aa9.47□□□□□ -0.89
PTPRF-213ENST00000481019 TRAV14DV4A0A0A6YYC5 116 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 A0A0G2JRQ6 117 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 CEBPZOSA8MTT3 80 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 SMLR1H3BR10 107 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 TSC22D2O75157 780 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 PRH1P02810 166 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 CD33P20138 364 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 MYCNOSP40205 109 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 AP2S1P53680 142 aaPredicted RBP9.46□□□□□ -0.9
PTPRF-213ENST00000481019 POLR2GP62487 172 aaKnown RBP eCLIP9.46□□□□□ -0.9
PTPRF-213ENST00000481019 EIF5AP63241 154 aaKnown RBP9.46□□□□□ -0.9
PTPRF-213ENST00000481019 TMEM267Q0VDI3 215 aaPredicted RBP9.46□□□□□ -0.9
PTPRF-213ENST00000481019 KPRPQ5T749 579 aaPredicted RBP9.46□□□□□ -0.9
PTPRF-213ENST00000481019 UBE2E2Q96LR5 201 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 AQP10Q96PS8 301 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 TMEM14BQ9NUH8 114 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 HSPB11Q9Y547 144 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 U3KQ87 197 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 TGP01266 2768 aa9.46□□□□□ -0.9
PTPRF-213ENST00000481019 KANTRA0A1W2PQU2 76 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 WIPF1O43516 503 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 SSSCA1O60232 199 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 OR9G9P0C7N8 305 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 RPL12P30050 165 aaKnown RBP9.45□□□□□ -0.9
PTPRF-213ENST00000481019 S100A11P31949 105 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 TPPP2P59282 170 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 ERHP84090 104 aaKnown RBP9.45□□□□□ -0.9
PTPRF-213ENST00000481019 RUNX1Q01196 453 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 BAXQ07812 192 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 FHL3Q13643 280 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 Q5BKY6 102 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 STX12Q86Y82 276 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 OR2C3Q8N628 320 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 OR11H4Q8NGC9 324 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 DTD1Q8TEA8 209 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 SRSF8Q9BRL6 282 aaKnown RBP9.45□□□□□ -0.9
PTPRF-213ENST00000481019 PLEKHA3Q9HB20 300 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 LYRM2Q9NU23 88 aaPredicted RBP9.45□□□□□ -0.9
PTPRF-213ENST00000481019 RCL1Q9Y2P8 373 aaKnown RBP9.45□□□□□ -0.9
PTPRF-213ENST00000481019 OR51B2Q9Y5P1 312 aa9.45□□□□□ -0.9
PTPRF-213ENST00000481019 G3V3Q6 166 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 TRGV3P03979 118 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 AREGP15514 252 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 CAV2P51636 162 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 SUB1P53999 127 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPRF-213ENST00000481019 KRTAP10-11P60412 298 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 RAB11AP62491 216 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 HBG1P69891 147 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 HBG2P69892 147 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 IZUMO4Q1ZYL8 232 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 KCNRGQ8N5I3 272 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 OR11H1Q8NG94 326 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 OR1N2Q8NGR9 330 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 QTRT1Q9BXR0 403 aaKnown RBP9.44□□□□□ -0.9
PTPRF-213ENST00000481019 ARL6Q9H0F7 186 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 RBKSQ9H477 322 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 HEYLQ9NQ87 328 aaPredicted RBP9.44□□□□□ -0.9
PTPRF-213ENST00000481019 ZNF355PQ9NSJ1 428 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 PSENENQ9NZ42 101 aa9.44□□□□□ -0.9
PTPRF-213ENST00000481019 STRAPQ9Y3F4 350 aaKnown RBP9.44□□□□□ -0.9
PTPRF-213ENST00000481019 IGHV4OR15-8A0A075B7B6 117 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 A0A087WW49 117 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 INS-IGF2F8WCM5 200 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 H0YIZ8 118 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 CYB5BO43169 146 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 TRBV12-3P01733 135 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 REG1AP05451 166 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 LGALS1P09382 135 aaKnown RBP9.43□□□□□ -0.9
PTPRF-213ENST00000481019 HOXD3P31249 432 aaPredicted RBP9.43□□□□□ -0.9
PTPRF-213ENST00000481019 SNCAP37840 140 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 RPL27AP46776 148 aaKnown RBP9.43□□□□□ -0.9
PTPRF-213ENST00000481019 HOXA1P49639 335 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms