RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 CYCSP99999 105 aaKnown RBP9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 C11orf87Q6NUJ2 197 aa9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 C8orf86Q6ZUL3 223 aa9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 NOXA1Q86UR1 476 aa9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 SLC24A4Q8NFF2 622 aa9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 OR4F17Q8NGA8 305 aa9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 TMEM170AQ8WVE7 144 aa9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 CXorf58Q96LI9 332 aa9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 OR4F4Q96R69 305 aa9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 NMES1Q9C002 83 aa9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 MED28Q9H204 178 aa9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 MGAT4CQ9UBM8 478 aa9.57□□□□□ -0.88
SHROOM3-205ENST00000481002 TRBV7-1A0A0A6YYK4 115 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 MFSD2BA6NFX1 497 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 I3L2K1 104 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 CORTO00230 105 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 SCGB1D2O95969 90 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 IFNA10P01566 189 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 NPY1RP25929 384 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 PAX9P55771 341 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 TAS2R30P59541 319 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 EXOSC2Q13868 293 aaKnown RBP9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 FAM209BQ5JX69 171 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 RNASEH2CQ8TDP1 164 aaKnown RBP9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 MISP3Q96FF7 219 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 RAX2Q96IS3 184 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 SMIM8Q96KF7 97 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 OR5B12Q96R08 314 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 RAB40CQ96S21 281 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 ATP6V0BQ99437 205 aa9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 RCL1Q9Y2P8 373 aaKnown RBP9.56□□□□□ -0.88
SHROOM3-205ENST00000481002 TRRAPQ9Y4A5 3859 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 C15orf62A8K5M9 175 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 K7EPK0 472 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 CCL24O00175 119 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 TMEM50AO95807 157 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 MT-CO2P00403 227 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 HSPB1P04792 205 aaKnown RBP9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 CXCL3P19876 107 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 MYCNOSP40205 109 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 RRAS2P62070 204 aaPredicted RBP9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 RPP30P78346 268 aaKnown RBP9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 RAB32Q13637 225 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 FCN2Q15485 313 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 ETV3LQ6ZN32 361 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 OR11H7Q8NGC8 314 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 ZNF502Q8TBZ5 544 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 SCARB1Q8WTV0 552 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 EEF1AKMT3Q96AZ1 226 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 C11orf1Q9H5F2 150 aa9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 RANGRFQ9HD47 186 aaPredicted RBP9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 PEF1Q9UBV8 284 aaKnown RBP9.55□□□□□ -0.88
SHROOM3-205ENST00000481002 ANKRD34BA5PLL1 514 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 SSSCA1O60232 199 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 TSPAN15O95858 294 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 FCGR2BP31994 310 aaPredicted RBP9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 ZNF616Q08AN1 781 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 FHL3Q13643 280 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 DEFB136Q30KP8 78 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 OR1N2Q8NGR9 330 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 PINX1Q96BK5 328 aaKnown RBP9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 WDR89Q96FK6 387 aaPredicted RBP9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 CCDC140Q96MF4 163 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 TXN2Q99757 166 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 FNDC4Q9H6D8 234 aaPredicted RBP9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 C21orf62Q9NYP8 219 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 PSENENQ9NZ42 101 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 STRAPQ9Y3F4 350 aaKnown RBP9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 LSM5Q9Y4Y9 91 aaKnown RBP9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 S4R3C0 116 aa9.54□□□□□ -0.88
SHROOM3-205ENST00000481002 IGHV4OR15-8A0A075B7B6 117 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 A0A087WW49 117 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 IGHV3-21A0A0B4J1V1 117 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 F8W735 103 aaPredicted RBP9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 LINC01619G3V211 115 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 TSC22D2O75157 780 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 TRBV12-3P01733 135 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 IGHV3-23P01764 117 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 IFNA4P05014 189 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 RAB11AP62491 216 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 MLANAQ16655 118 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 SPANXN5Q5MJ07 72 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 CLEC19AQ6UXS0 136 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 Q6ZNX1 250 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 DPF1Q92782 380 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 DUX3Q96PT4 197 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 OR4C12Q96R67 309 aa9.53□□□□□ -0.88
SHROOM3-205ENST00000481002 RPS10-NUDT3A0A1W2PQS6 291 aa9.52□□□□□ -0.89
SHROOM3-205ENST00000481002 BMPR1BO00238 502 aa9.52□□□□□ -0.89
SHROOM3-205ENST00000481002 DEDDO75618 318 aa9.52□□□□□ -0.89
SHROOM3-205ENST00000481002 RLN2P04090 185 aa9.52□□□□□ -0.89
SHROOM3-205ENST00000481002 CLEC3BP05452 202 aa9.52□□□□□ -0.89
SHROOM3-205ENST00000481002 PVALBP20472 110 aaPredicted RBP9.52□□□□□ -0.89
SHROOM3-205ENST00000481002 GPX4P36969 197 aaPredicted RBP9.52□□□□□ -0.89
SHROOM3-205ENST00000481002 OPRK1P41145 380 aa9.52□□□□□ -0.89
SHROOM3-205ENST00000481002 MFAP4P55083 255 aa9.52□□□□□ -0.89
SHROOM3-205ENST00000481002 CD69Q07108 199 aa9.52□□□□□ -0.89
SHROOM3-205ENST00000481002 TMEM14EPQ6UXP3 125 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms