RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 LAMTOR1Q6IAA8 161 aa13.19□□□□□ -0.3
SCAMP3-207ENST00000480219 STX12Q86Y82 276 aa13.19□□□□□ -0.3
SCAMP3-207ENST00000480219 GGACTQ9BVM4 153 aa13.19□□□□□ -0.3
SCAMP3-207ENST00000480219 GON7Q9BXV9 100 aa13.19□□□□□ -0.3
SCAMP3-207ENST00000480219 TEP1Q99973 2627 aaKnown RBP13.18□□□□□ -0.3
SCAMP3-207ENST00000480219 CYB5BO43169 146 aa13.18□□□□□ -0.3
SCAMP3-207ENST00000480219 IGHG4P01861 327 aa13.18□□□□□ -0.3
SCAMP3-207ENST00000480219 HNRNPCP07910 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCAMP3-207ENST00000480219 APELAP0DMC3 54 aa13.18□□□□□ -0.3
SCAMP3-207ENST00000480219 HIST1H1BP16401 226 aaKnown RBP13.18□□□□□ -0.3
SCAMP3-207ENST00000480219 EIF2B2P49770 351 aaKnown RBP13.18□□□□□ -0.3
SCAMP3-207ENST00000480219 NHLH2Q02577 135 aa13.18□□□□□ -0.3
SCAMP3-207ENST00000480219 ETV3LQ6ZN32 361 aa13.18□□□□□ -0.3
SCAMP3-207ENST00000480219 WIPF2Q8TF74 440 aaPredicted RBP13.18□□□□□ -0.3
SCAMP3-207ENST00000480219 NOL4LQ96MY1 436 aaPredicted RBP13.18□□□□□ -0.3
SCAMP3-207ENST00000480219 S100A11P31949 105 aa13.17□□□□□ -0.3
SCAMP3-207ENST00000480219 GPX4P36969 197 aaPredicted RBP13.17□□□□□ -0.3
SCAMP3-207ENST00000480219 EXOSC2Q13868 293 aaKnown RBP13.17□□□□□ -0.3
SCAMP3-207ENST00000480219 VWC2Q2TAL6 325 aa13.17□□□□□ -0.3
SCAMP3-207ENST00000480219 TMEM95Q3KNT9 176 aa13.17□□□□□ -0.3
SCAMP3-207ENST00000480219 C19orf35Q6ZS72 473 aa13.17□□□□□ -0.3
SCAMP3-207ENST00000480219 RNF152Q8N8N0 203 aa13.17□□□□□ -0.3
SCAMP3-207ENST00000480219 OR10P1Q8NGE3 313 aa13.17□□□□□ -0.3
SCAMP3-207ENST00000480219 OR2T6Q8NHC8 308 aa13.17□□□□□ -0.3
SCAMP3-207ENST00000480219 CACNG8Q8WXS5 425 aa13.17□□□□□ -0.3
SCAMP3-207ENST00000480219 PINX1Q96BK5 328 aaKnown RBP13.17□□□□□ -0.3
SCAMP3-207ENST00000480219 I3L2K1 104 aa13.16□□□□□ -0.3
SCAMP3-207ENST00000480219 CST7O76096 145 aa13.16□□□□□ -0.3
SCAMP3-207ENST00000480219 CRYBA1P05813 215 aa13.16□□□□□ -0.3
SCAMP3-207ENST00000480219 HBG1P69891 147 aa13.16□□□□□ -0.3
SCAMP3-207ENST00000480219 HBG2P69892 147 aa13.16□□□□□ -0.3
SCAMP3-207ENST00000480219 DLK1P80370 383 aa13.16□□□□□ -0.3
SCAMP3-207ENST00000480219 CD69Q07108 199 aa13.16□□□□□ -0.3
SCAMP3-207ENST00000480219 ATP6V1FQ16864 119 aa13.16□□□□□ -0.3
SCAMP3-207ENST00000480219 OR5T1Q8NG75 326 aa13.16□□□□□ -0.3
SCAMP3-207ENST00000480219 BSCL2Q96G97 398 aaPredicted RBP13.16□□□□□ -0.3
SCAMP3-207ENST00000480219 LINC00527Q9UJ94 153 aa13.16□□□□□ -0.3
SCAMP3-207ENST00000480219 K7EIM0 57 aa13.15□□□□□ -0.3
SCAMP3-207ENST00000480219 TAAR5O14804 337 aa13.15□□□□□ -0.3
SCAMP3-207ENST00000480219 IFNA4P05014 189 aa13.15□□□□□ -0.3
SCAMP3-207ENST00000480219 DEFA4P12838 97 aa13.15□□□□□ -0.3
SCAMP3-207ENST00000480219 PSMB8P28062 276 aa13.15□□□□□ -0.3
SCAMP3-207ENST00000480219 SLC38A11Q08AI6 406 aa13.15□□□□□ -0.3
SCAMP3-207ENST00000480219 OR5C1Q8NGR4 320 aa13.15□□□□□ -0.3
SCAMP3-207ENST00000480219 FNDC4Q9H6D8 234 aaPredicted RBP13.15□□□□□ -0.3
SCAMP3-207ENST00000480219 SLA2Q9H6Q3 261 aa13.15□□□□□ -0.3
SCAMP3-207ENST00000480219 THYN1Q9P016 225 aa13.15□□□□□ -0.3
SCAMP3-207ENST00000480219 FBXL17Q9UF56 701 aa13.15□□□□□ -0.3
SCAMP3-207ENST00000480219 MDKP21741 143 aaPredicted RBP13.14□□□□□ -0.31
SCAMP3-207ENST00000480219 NKX2-5P52952 324 aaPredicted RBP13.14□□□□□ -0.31
SCAMP3-207ENST00000480219 SLC25A24Q6NUK1 477 aa13.14□□□□□ -0.31
SCAMP3-207ENST00000480219 TMUB2Q71RG4 321 aa13.14□□□□□ -0.31
SCAMP3-207ENST00000480219 COMMD1Q8N668 190 aa13.14□□□□□ -0.31
SCAMP3-207ENST00000480219 NECAP1Q8NC96 275 aa13.14□□□□□ -0.31
SCAMP3-207ENST00000480219 OR1S2Q8NGQ3 325 aa13.14□□□□□ -0.31
SCAMP3-207ENST00000480219 LINC01006Q8NI28 216 aa13.14□□□□□ -0.31
SCAMP3-207ENST00000480219 MYOZ3Q8TDC0 251 aa13.14□□□□□ -0.31
SCAMP3-207ENST00000480219 PARD6GQ9BYG4 376 aaPredicted RBP13.14□□□□□ -0.31
SCAMP3-207ENST00000480219 RPS10-NUDT3A0A1W2PQS6 291 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 FAM223BA6NKX1 122 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 BCL2L11O43521 198 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 ELANEP08246 267 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 FCGR2BP31994 310 aaPredicted RBP13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 SLC35B1P78383 322 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 FOXE3Q13461 319 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 ARSJQ5FYB0 599 aaPredicted RBP13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 OR8G2PQ6IF36 304 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 ETFRF1Q6IPR1 90 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 FAM223AQ8IWN6 122 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 VN1R17PQ8TDU5 208 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 ATP6V0BQ99437 205 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 ATP5SQ99766 215 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 TMEM147Q9BVK8 224 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 ARL6Q9H0F7 186 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 WFDC1Q9HC57 220 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 CYTL1Q9NRR1 136 aa13.13□□□□□ -0.31
SCAMP3-207ENST00000480219 PSMB11A5LHX3 300 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 DFFBO76075 338 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 MT-CO2P00403 227 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 PRH1P02810 166 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 C4BPBP20851 252 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 AP2S1P53680 142 aaPredicted RBP13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 SLC16A13Q7RTY0 426 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 TMEM217Q8N7C4 229 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 TMEM116Q8NCL8 245 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 OR4F5Q8NH21 305 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 MISP3Q96FF7 219 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 ARPC5LQ9BPX5 153 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 ZC4H2Q9NQZ6 224 aa13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 PAIP2BQ9ULR5 123 aaKnown RBP13.12□□□□□ -0.31
SCAMP3-207ENST00000480219 NDUFB8O95169 186 aa13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 OPRK1P41145 380 aa13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 RHOGP84095 191 aa13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 KIAA0141Q14154 515 aaPredicted RBP13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 GAMTQ14353 236 aa13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 ZNF266Q14584 549 aa13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 TEX38Q6PEX7 206 aa13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 UBAC2Q8NBM4 344 aa13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 USMG5Q96IX5 58 aa13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 ARV1Q9H2C2 271 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms