RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 NDUFA4L2Q9NRX3 87 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 C1RLQ9NZP8 487 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 WSB1Q9Y6I7 421 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 ATRQ13535 2644 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 IGHV7-81A0A0B4J1V7 117 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 A0A1W2PN81 502 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 IGLC7A0M8Q6 106 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 IGSF23A1L1A6 192 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 C15orf62A8K5M9 175 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 TEX22C9J3V5 150 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 E7EUB6 86 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 H3BP45 60 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 KCNAB3O43448 404 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 ACTL6BO94805 426 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 OPN1MWP04001 364 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 AMY1AP04745 511 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 OPN1MW2P0DN77 364 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 OPN1MW3P0DN78 364 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 HKR1P10072 659 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 RPL12P30050 165 aaKnown RBP5.25□□□□□ -1.57
USP48-208ENST00000479177 CHRNA7P36544 502 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 CAV2P51636 162 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 RPL23AP62750 156 aaKnown RBP5.25□□□□□ -1.57
USP48-208ENST00000479177 CLEC9AQ6UXN8 241 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 C16orf82Q7Z2V1 217 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 KCNRGQ8N5I3 272 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 OR2C3Q8N628 320 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 TMEM252Q8N6L7 170 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 SIGLECL1Q8N7X8 197 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 SSMEM1Q8WWF3 244 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 SRSF12Q8WXF0 261 aaKnown RBP5.25□□□□□ -1.57
USP48-208ENST00000479177 ARPC1AQ92747 370 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 HSPB9Q9BQS6 159 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 HINT2Q9BX68 163 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 MFFQ9GZY8 342 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 ENY2Q9NPA8 101 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 PSENENQ9NZ42 101 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 PITPNC1Q9UKF7 332 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 VPREB3Q9UKI3 123 aa5.25□□□□□ -1.57
USP48-208ENST00000479177 BTBD17A6NE02 478 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 FAM24AA6NFZ4 105 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 M0QZK8 103 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 RNASE2P10153 161 aaKnown RBP5.24□□□□□ -1.57
USP48-208ENST00000479177 AREGP15514 252 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 NPY1RP25929 384 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 NUP62P37198 522 aaPredicted RBP5.24□□□□□ -1.57
USP48-208ENST00000479177 CX3CL1P78423 397 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 EWSR1Q01844 656 aaKnown RBP eCLIP5.24□□□□□ -1.57
USP48-208ENST00000479177 WT1-ASQ06250 92 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 BAXQ07812 192 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 TMEM267Q0VDI3 215 aaPredicted RBP5.24□□□□□ -1.57
USP48-208ENST00000479177 OR2F1Q13607 317 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 FXYD3Q14802 87 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 BSXQ3C1V8 233 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 LGALSLQ3ZCW2 172 aaPredicted RBP5.24□□□□□ -1.57
USP48-208ENST00000479177 SPANXN5Q5MJ07 72 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 TMEM14EPQ6UXP3 125 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 ZNF562Q6V9R5 426 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 ACOT7LQ6ZUV0 252 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 HAPLN4Q86UW8 402 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 STPG2Q8N412 459 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 TMEM86BQ8N661 226 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 INO80EQ8NBZ0 244 aaPredicted RBP5.24□□□□□ -1.57
USP48-208ENST00000479177 SLC24A4Q8NFF2 622 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 OR10W1Q8NGF6 305 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 TMEM170AQ8WVE7 144 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 BSCL2Q96G97 398 aaPredicted RBP5.24□□□□□ -1.57
USP48-208ENST00000479177 RASL11BQ9BPW5 248 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 SRSF8Q9BRL6 282 aaKnown RBP5.24□□□□□ -1.57
USP48-208ENST00000479177 SLC25A31Q9H0C2 315 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 HEYLQ9NQ87 328 aaPredicted RBP5.24□□□□□ -1.57
USP48-208ENST00000479177 FBXL17Q9UF56 701 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 STRAPQ9Y3F4 350 aaKnown RBP5.24□□□□□ -1.57
USP48-208ENST00000479177 FBXO7Q9Y3I1 522 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 HSPB11Q9Y547 144 aa5.24□□□□□ -1.57
USP48-208ENST00000479177 A0A0D9SG52 128 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 DNAJC9-AS1A6NH13 148 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 SH2D7A6NKC9 451 aaPredicted RBP5.23□□□□□ -1.57
USP48-208ENST00000479177 BCL2L11O43521 198 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 CST7O76096 145 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 CNIH1O95406 144 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 METTL15P1P0C7V9 234 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 OR13C7P0DN81 318 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 EGR2P11161 476 aaPredicted RBP5.23□□□□□ -1.57
USP48-208ENST00000479177 SRD5A1P18405 259 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 SULT1A1P50225 295 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 CRIP2P52943 208 aaPredicted RBP5.23□□□□□ -1.57
USP48-208ENST00000479177 AP2S1P53680 142 aaPredicted RBP5.23□□□□□ -1.57
USP48-208ENST00000479177 ARL16Q0P5N6 197 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 SCGB2A2Q13296 93 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 C2orf83Q53S99 150 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 ASPHD1Q5U4P2 390 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 TMUB2Q71RG4 321 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 HSD17B13Q7Z5P4 300 aaPredicted RBP5.23□□□□□ -1.57
USP48-208ENST00000479177 STX12Q86Y82 276 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 ZNF114Q8NC26 417 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 FAM103A1Q9BTL3 118 aaKnown RBP5.23□□□□□ -1.57
USP48-208ENST00000479177 ARL6Q9H0F7 186 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 HIPK2Q9H2X6 1198 aa5.23□□□□□ -1.57
USP48-208ENST00000479177 ZC4H2Q9NQZ6 224 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms