RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 TICRRQ7Z2Z1 1910 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 DOCK4Q8N1I0 1966 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 IGHV3-43A0A0B4J1X8 118 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 IGHV1-58A0A0C4DH39 117 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF860A6NHJ4 632 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF670-ZNF695F2Z2N8 137 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 BPY2O14599 106 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF324O75467 553 aaPredicted RBP4.09□□□□□ -1.75
RC3H1-204ENST00000479099 ATP6V0CP27449 155 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 PSMB8P28062 276 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 EIF2B2P49770 351 aaKnown RBP4.09□□□□□ -1.75
RC3H1-204ENST00000479099 CMC4P56277 68 aaPredicted RBP4.09□□□□□ -1.75
RC3H1-204ENST00000479099 NDUFA6P56556 154 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 LINC00205P59089 165 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 LYZP61626 148 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 CDK6Q00534 326 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 NCMAPQ5T1S8 102 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 SSX8Q7RTT4 187 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF329Q86UD4 541 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 C10orf126Q8N4M7 172 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 C3orf22Q8N5N4 141 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 PPTC7Q8NI37 304 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 SHANK2-AS3Q9BTD1 123 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 CHCHD7Q9BUK0 85 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 SOX21Q9Y651 276 aaPredicted RBP4.09□□□□□ -1.75
RC3H1-204ENST00000479099 NAIPQ13075 1403 aa4.09□□□□□ -1.75
RC3H1-204ENST00000479099 PIKFYVEQ9Y2I7 2098 aa4.09□□□□□ -1.76
RC3H1-204ENST00000479099 IGLV11-55A0A075B6I3 123 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 A0A0D9SEW6 157 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 A0A1B0GVX0 72 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 A0A1W2PPR1 153 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 BUB1B-PAK6H3BSN5 160 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 OR2T1O43869 369 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 CST7O76096 145 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 PRM2P04554 102 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 AKAIN1P0CW23 69 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 HIST1H1BP16401 226 aaKnown RBP4.08□□□□□ -1.76
RC3H1-204ENST00000479099 LGALS3P17931 250 aaKnown RBP4.08□□□□□ -1.76
RC3H1-204ENST00000479099 CRYGSP22914 178 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 RPL22P35268 128 aaKnown RBP4.08□□□□□ -1.76
RC3H1-204ENST00000479099 RBM11P57052 281 aaKnown RBP4.08□□□□□ -1.76
RC3H1-204ENST00000479099 PCM1Q15154 2024 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 LGALS9BQ3B8N2 356 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 NUP210LQ5VU65 1888 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 AADACL3Q5VUY0 350 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 TNS2Q63HR2 1409 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 LGALS9CQ6DKI2 356 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 NLRC5Q86WI3 1866 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 NR2C2APQ86WQ0 139 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 FANCMQ8IYD8 2048 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 SUMF2Q8NBJ7 301 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 DSCAML1Q8TD84 2053 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 ATAD5Q96QE3 1844 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 OR4C12Q96R67 309 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 TBL1YQ9BQ87 522 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 DERL1Q9BUN8 251 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 KIAA1671Q9BY89 1806 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 TMEM191AQ9H0A3 160 aa4.08□□□□□ -1.76
RC3H1-204ENST00000479099 ATG2AQ2TAZ0 1938 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 ZNFX1Q9P2E3 1918 aaKnown RBP4.07□□□□□ -1.76
RC3H1-204ENST00000479099 ANKRD31Q8N7Z5 1873 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 AKAP12Q02952 1782 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 CECR2Q9BXF3 1484 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 MYOM3Q5VTT5 1437 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 IGKV2D-30A0A075B6S6 120 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 IGHV3-49A0A0A0MS15 119 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 SPAARA0A1B0GVQ0 90 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 IGLV3-25P01717 112 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 APCSP02743 223 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 P0C879 139 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 GUCA1AP43080 201 aaPredicted RBP4.07□□□□□ -1.76
RC3H1-204ENST00000479099 GNB2P62879 340 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 RPL30P62888 115 aaKnown RBP4.07□□□□□ -1.76
RC3H1-204ENST00000479099 ZNF678Q5SXM1 525 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 LINC00305Q7Z4B0 112 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 TMEM256Q8N2U0 113 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 C15orf56Q8N910 161 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 LINC01006Q8NI28 216 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 STAG3L4Q8TBR4 150 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 SDF2Q99470 211 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 LHX9Q9NQ69 397 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 IL36BQ9NZH7 164 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 FUT9Q9Y231 359 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 SCN2AQ99250 2005 aa4.07□□□□□ -1.76
RC3H1-204ENST00000479099 ZNF638Q14966 1978 aaKnown RBP4.07□□□□□ -1.76
RC3H1-204ENST00000479099 ZFYVE16Q7Z3T8 1539 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 ATG2BQ96BY7 2078 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 NCKAP5O14513 1909 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 A8MWP6 167 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 INSP01308 110 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
RC3H1-204ENST00000479099 Q1RN00 199 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 FAM78AQ5JUQ0 283 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 ZNF880Q6PDB4 577 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 PHF5AQ7RTV0 110 aaKnown RBP4.06□□□□□ -1.76
RC3H1-204ENST00000479099 C14orf178Q8N769 122 aaPredicted RBP4.06□□□□□ -1.76
RC3H1-204ENST00000479099 DAND5Q8N907 189 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 BRK1Q8WUW1 75 aa4.06□□□□□ -1.76
RC3H1-204ENST00000479099 TMEM158Q8WZ71 300 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms