RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 AARDQ4LEZ3 155 aa11.91□□□□□ -0.5
GARNL3-215ENST00000478702 SPINK9Q5DT21 86 aa11.91□□□□□ -0.5
GARNL3-215ENST00000478702 FAM219AQ8IW50 185 aa11.91□□□□□ -0.5
GARNL3-215ENST00000478702 SLC35G3Q8N808 338 aa11.91□□□□□ -0.5
GARNL3-215ENST00000478702 DYNLRB2Q8TF09 96 aa11.91□□□□□ -0.5
GARNL3-215ENST00000478702 SCARB1Q8WTV0 552 aa11.91□□□□□ -0.5
GARNL3-215ENST00000478702 GALNT14Q96FL9 552 aa11.91□□□□□ -0.5
GARNL3-215ENST00000478702 BSCL2Q96G97 398 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-215ENST00000478702 SCGB3A2Q96PL1 93 aa11.91□□□□□ -0.5
GARNL3-215ENST00000478702 ZNF436Q9C0F3 470 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-215ENST00000478702 C21orf62Q9NYP8 219 aa11.91□□□□□ -0.5
GARNL3-215ENST00000478702 IGHV3-21A0A0B4J1V1 117 aa11.9□□□□□ -0.5
GARNL3-215ENST00000478702 OR2T8A6NH00 312 aa11.9□□□□□ -0.5
GARNL3-215ENST00000478702 CD300EQ496F6 205 aaPredicted RBP11.9□□□□□ -0.5
GARNL3-215ENST00000478702 SPANXN2Q5MJ10 180 aa11.9□□□□□ -0.5
GARNL3-215ENST00000478702 SPSB3Q6PJ21 355 aa11.9□□□□□ -0.5
GARNL3-215ENST00000478702 PLET1Q6UQ28 207 aa11.9□□□□□ -0.5
GARNL3-215ENST00000478702 UNQ9165/PRO28630Q6UXU0 137 aa11.9□□□□□ -0.5
GARNL3-215ENST00000478702 SELENOHQ8IZQ5 122 aaKnown RBP11.9□□□□□ -0.5
GARNL3-215ENST00000478702 TOMM5Q8N4H5 51 aa11.9□□□□□ -0.5
GARNL3-215ENST00000478702 DEDD2Q8WXF8 326 aa11.9□□□□□ -0.5
GARNL3-215ENST00000478702 CACNG8Q8WXS5 425 aa11.9□□□□□ -0.5
GARNL3-215ENST00000478702 TMEM190Q8WZ59 177 aa11.9□□□□□ -0.5
GARNL3-215ENST00000478702 I3L2K1 104 aa11.89□□□□□ -0.51
GARNL3-215ENST00000478702 ERHP84090 104 aaKnown RBP11.89□□□□□ -0.51
GARNL3-215ENST00000478702 TMEM268Q5VZI3 342 aa11.89□□□□□ -0.51
GARNL3-215ENST00000478702 SGPP2Q8IWX5 399 aa11.89□□□□□ -0.51
GARNL3-215ENST00000478702 MISP3Q96FF7 219 aa11.89□□□□□ -0.51
GARNL3-215ENST00000478702 PDCD10Q9BUL8 212 aa11.89□□□□□ -0.51
GARNL3-215ENST00000478702 SRRQ9GZT4 340 aa11.89□□□□□ -0.51
GARNL3-215ENST00000478702 TECRQ9NZ01 308 aaKnown RBP11.89□□□□□ -0.51
GARNL3-215ENST00000478702 TMEM56-RWDD3S4R434 201 aa11.89□□□□□ -0.51
GARNL3-215ENST00000478702 IGHV3-35A0A0C4DH35 117 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 ZNF320A2RRD8 509 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 IFNA17P01571 189 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 CBLN1P23435 193 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 FCGR2BP31994 310 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-215ENST00000478702 ADMP35318 185 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 HOXA1P49639 335 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-215ENST00000478702 ELLP55199 621 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-215ENST00000478702 SUPT4H1P63272 117 aaKnown RBP11.88□□□□□ -0.51
GARNL3-215ENST00000478702 TMEM187Q14656 261 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 DEFB114Q30KQ6 69 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 Q6ZRM9 215 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 GTSCR1Q86UQ5 136 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 UBAC2Q8NBM4 344 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 IL22RA2Q969J5 263 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 CHRDL1Q9BU40 450 aa11.88□□□□□ -0.51
GARNL3-215ENST00000478702 MT-CO2P00403 227 aa11.87□□□□□ -0.51
GARNL3-215ENST00000478702 HAGHQ16775 308 aa11.87□□□□□ -0.51
GARNL3-215ENST00000478702 Q56UQ5 140 aa11.87□□□□□ -0.51
GARNL3-215ENST00000478702 PVRIGQ6DKI7 326 aa11.87□□□□□ -0.51
GARNL3-215ENST00000478702 MARC2Q969Z3 335 aa11.87□□□□□ -0.51
GARNL3-215ENST00000478702 ZNF414Q96IQ9 312 aa11.87□□□□□ -0.51
GARNL3-215ENST00000478702 SPATA25Q9BR10 227 aa11.87□□□□□ -0.51
GARNL3-215ENST00000478702 PRR13Q9NZ81 148 aa11.87□□□□□ -0.51
GARNL3-215ENST00000478702 CACNG5Q9UF02 275 aa11.87□□□□□ -0.51
GARNL3-215ENST00000478702 MLXQ9UH92 298 aa11.87□□□□□ -0.51
GARNL3-215ENST00000478702 UFC1Q9Y3C8 167 aa11.87□□□□□ -0.51
GARNL3-215ENST00000478702 ALMS1Q8TCU4 4167 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 NDUFA4O00483 81 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 C8orf88P0DMB2 117 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 RNASE2P10153 161 aaKnown RBP11.86□□□□□ -0.51
GARNL3-215ENST00000478702 AKR1C4P17516 323 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 SPCS3P61009 180 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 BSXQ3C1V8 233 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 TM4SF20Q53R12 229 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 TMEM61Q8N0U2 210 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 UXS1Q8NBZ7 420 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 OR52E5Q8NH55 327 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 GPR146Q96CH1 333 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 TXN2Q99757 166 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 ENY2Q9NPA8 101 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.86□□□□□ -0.51
GARNL3-215ENST00000478702 NDUFA13Q9P0J0 144 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 KCNIP3Q9Y2W7 256 aa11.86□□□□□ -0.51
GARNL3-215ENST00000478702 ZNF785A8K8V0 405 aa11.85□□□□□ -0.51
GARNL3-215ENST00000478702 CORTO00230 105 aa11.85□□□□□ -0.51
GARNL3-215ENST00000478702 CTSGP08311 255 aa11.85□□□□□ -0.51
GARNL3-215ENST00000478702 SNCAP37840 140 aa11.85□□□□□ -0.51
GARNL3-215ENST00000478702 MFAP4P55083 255 aa11.85□□□□□ -0.51
GARNL3-215ENST00000478702 SRPXP78539 464 aa11.85□□□□□ -0.51
GARNL3-215ENST00000478702 ZNF57Q68EA5 555 aaPredicted RBP11.85□□□□□ -0.51
GARNL3-215ENST00000478702 BTNL8Q6UX41 500 aa11.85□□□□□ -0.51
GARNL3-215ENST00000478702 PINX1Q96BK5 328 aaKnown RBP11.85□□□□□ -0.51
GARNL3-215ENST00000478702 WDR89Q96FK6 387 aaPredicted RBP11.85□□□□□ -0.51
GARNL3-215ENST00000478702 SLC25A21Q9BQT8 299 aaPredicted RBP11.85□□□□□ -0.51
GARNL3-215ENST00000478702 KRTAP17-1Q9BYP8 105 aa11.85□□□□□ -0.51
GARNL3-215ENST00000478702 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
GARNL3-215ENST00000478702 MRPL27Q9P0M9 148 aaKnown RBP11.85□□□□□ -0.51
GARNL3-215ENST00000478702 A0A0B4J2A0 478 aa11.84□□□□□ -0.51
GARNL3-215ENST00000478702 ANXA3P12429 323 aa11.84□□□□□ -0.51
GARNL3-215ENST00000478702 CD81P60033 236 aa11.84□□□□□ -0.51
GARNL3-215ENST00000478702 NMSQ5H8A3 153 aa11.84□□□□□ -0.51
GARNL3-215ENST00000478702 TMED4Q7Z7H5 227 aa11.84□□□□□ -0.51
GARNL3-215ENST00000478702 SDHCQ99643 169 aaPredicted RBP11.84□□□□□ -0.51
GARNL3-215ENST00000478702 SHPKQ9UHJ6 478 aa11.84□□□□□ -0.51
GARNL3-215ENST00000478702 NUPL2O15504 423 aaKnown RBP11.83□□□□□ -0.52
GARNL3-215ENST00000478702 IGHV3-48P01763 117 aa11.83□□□□□ -0.52
GARNL3-215ENST00000478702 SULT1A3P0DMM9 295 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms