RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 YIF1BQ5BJH7 314 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 GCSAMLQ5JQS6 135 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 LINC01590Q5TEZ4 76 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 MRPL21Q7Z2W9 205 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLC51BQ86UW2 128 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 CALHM1Q8IU99 346 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR6V1Q8N148 313 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 STX19Q8N4C7 294 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 ARRDC1Q8N5I2 433 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 SPERTQ8NA61 448 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR8G5Q8NG78 346 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR9Q1Q8NGQ5 310 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR13G1Q8NGZ3 307 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR4K13Q8NH42 304 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 COQ8AQ8NI60 647 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZFAND1Q8TCF1 268 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 ASB13Q8WXK3 278 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 ACOT12Q8WYK0 555 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLC7A6Q92536 515 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 NARS2Q96I59 477 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 HYLS1Q96M11 299 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 NMNAT3Q96T66 252 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 C7orf50Q9BRJ6 194 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 COPS4Q9BT78 406 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 ADAT1Q9BUB4 502 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 TSSK6Q9BXA6 273 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 BEX2Q9BXY8 128 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 SAMD10Q9BYL1 202 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 PLA2G12AQ9BZM1 189 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 NAA50Q9GZZ1 169 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR51B6Q9H340 312 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 PATZ1Q9HBE1 687 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 TMEM106BQ9NUM4 274 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 MED9Q9NWA0 146 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 MCUBQ9NWR8 336 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 COPZ2Q9P299 210 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 YTHDF2Q9Y5A9 579 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 TSSC4Q9Y5U2 329 aaPredicted RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 COL6A5A8TX70 2615 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 IGKV2D-24A0A075B6R9 120 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 TRAV6A0A075B6T7 132 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 A0A0G2JMP0 313 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 A0A0X1KG70 313 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 TMEM210A6NLX4 147 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 CEACAM18A8MTB9 384 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 SERPINE3A8MV23 424 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF670-ZNF695F2Z2N8 137 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 CCRL2O00421 344 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 RER1O15258 196 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 MAGEB4O15481 346 aaPredicted RBP2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 GMDSO60547 372 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 HSBP1O75506 76 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 MPZL1O95297 269 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 SOX14O95416 240 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 IGLV3-1P01715 115 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 HMGN1P05114 100 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 GLAP06280 429 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 PSKH1P11801 424 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 IL7P13232 177 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 COL8A2P25067 703 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 PSMA1P25786 263 aaKnown RBP2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 PSMB9P28065 219 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 HSD11B1P28845 292 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 PYCR1P32322 319 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 BMI1P35226 326 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 SRP14P37108 136 aaKnown RBP2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 ERFP50548 548 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 DAPP51397 102 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 PPP3R1P63098 170 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 CCL8P80075 99 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 MRPS15P82914 257 aaKnown RBP2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 CDK5Q00535 292 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 IL5RAQ01344 420 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 IFITM3Q01628 133 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 MLLT11Q13015 90 aaPredicted RBP2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR8B8Q15620 311 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 TRAM1Q15629 374 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 C5orf64Q2M2E5 130 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 CLEC12AQ5QGZ9 265 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 NXNL2Q5VZ03 156 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 TEX36Q5VZQ5 186 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 CD200R1LQ6Q8B3 271 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 DEGS2Q6QHC5 323 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 TMPRSS11AQ6ZMR5 421 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 LINC00336Q6ZUF6 198 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 DCXRQ7Z4W1 244 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 GID4Q8IVV7 300 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 IQCF2Q8IXL9 164 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZCCHC24Q8N2G6 241 aaKnown RBP2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 CYB561A3Q8NBI2 242 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR4M2Q8NGB6 313 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR8B3Q8NGG8 313 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR11L1Q8NGX0 322 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR10Z1Q8NGY1 313 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR6N2Q8NGY6 317 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR8U1Q8NH10 309 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 OTOSQ8NHW6 89 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 SUN5Q8TC36 379 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF418Q8TF45 676 aaPredicted RBP2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 RNF133Q8WVZ7 376 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms