RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 RIMS2Q9UQ26 1411 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 TTC41PQ6P2S7 1318 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 OBSL1O75147 1896 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 LOC285556D6RIA3 1793 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 IGHV1-58A0A0C4DH39 117 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 C1orf232A0A0U1RR37 186 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 TRBV6-4A0A1B0GX49 114 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 C10orf142B7Z368 130 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 J3QRK9 145 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 NDUFS8O00217 210 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 CCL25O15444 150 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 DNAL4O96015 105 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 ASS1P00966 412 aaKnown RBP-0.14□□□□□ -2.43
HPS3-205ENST00000478525 CSTAP01040 98 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 FAM228BP0C875 321 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 DEFA4P12838 97 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 CCL2P13500 99 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 PSMD7P51665 324 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 OR10A3P58181 314 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 CNBPP62633 177 aaKnown RBP-0.14□□□□□ -2.43
HPS3-205ENST00000478525 SLAMF1Q13291 335 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 GRK1Q15835 563 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 HLA-DRB5Q30154 266 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 C12orf74Q32Q52 190 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 TNFAIP8L3Q5GJ75 292 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 SDHAF4Q5VUM1 108 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 KRTAP26-1Q6PEX3 210 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 DNM1P34Q6PK57 102 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 Q6ZQT0 140 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 TEN1Q86WV5 123 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 OR5L1Q8NGL2 311 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 OR13C4Q8NGS5 318 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 OR2T27Q8NH04 317 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 OR10J5Q8NHC4 309 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 TMEM254Q8TBM7 123 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 RNASE6Q93091 150 aaKnown RBP-0.14□□□□□ -2.43
HPS3-205ENST00000478525 TP53RKQ96S44 253 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 LYSMD1Q96S90 227 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 MED10Q9BTT4 135 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 BBS2Q9BXC9 721 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 C6orf62Q9GZU0 229 aaPredicted RBP-0.14□□□□□ -2.43
HPS3-205ENST00000478525 HDHD2Q9H0R4 259 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 TLNRD1Q9H1K6 362 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 EFCAB1Q9HAE3 211 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 HRASLSQ9HDD0 168 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 SLC39A9Q9NUM3 307 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 PAQR5Q9NXK6 330 aaPredicted RBP-0.14□□□□□ -2.43
HPS3-205ENST00000478525 ANAPC10Q9UM13 185 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 TP53TG1Q9Y2A0 90 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 POLR1DQ9Y2S0 133 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 RBMX2Q9Y388 322 aaKnown RBP-0.14□□□□□ -2.43
HPS3-205ENST00000478525 COQ4Q9Y3A0 265 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 HIVEP3Q5T1R4 2406 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 TOPBP1Q92547 1522 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 NSD1Q96L73 2696 aaPredicted RBP-0.14□□□□□ -2.43
HPS3-205ENST00000478525 DCCP43146 1447 aa-0.14□□□□□ -2.43
HPS3-205ENST00000478525 PTPRDP23468 1912 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 UBR5O95071 2799 aaPredicted RBP-0.15□□□□□ -2.43
HPS3-205ENST00000478525 TMEM94Q12767 1356 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 UNC13CQ8NB66 2214 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 TMED7-TICAM2A0A0A6YYA0 188 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 TRBV30A0A0K0K1B3 111 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 TMEM213A2RRL7 107 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 F5H768 121 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 H3BRM9 83 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 GPR31O00270 319 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 TOX3O15405 576 aaPredicted RBP-0.15□□□□□ -2.43
HPS3-205ENST00000478525 CCL16O15467 120 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 DHFRP00374 187 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 APOEP02649 317 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 ORM1P02763 201 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 CLPSP04118 112 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 IVLP07476 585 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 SLC35E2BP0CK96 405 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 CCL4P13236 92 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 TUBG1P23258 451 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 HIST1H2BOP23527 126 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 HIST1H2BBP33778 126 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 SSR2P43308 183 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 SPINT3P49223 89 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 ATP5J2P56134 94 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 HIST1H2BDP58876 126 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 CXCR4P61073 352 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 YPEL3P61236 119 aaPredicted RBP-0.15□□□□□ -2.43
HPS3-205ENST00000478525 HIST1H2BCP62807 126 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 SUPT4H1P63272 117 aaKnown RBP-0.15□□□□□ -2.43
HPS3-205ENST00000478525 SMAGPQ0VAQ4 97 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 JOSD1Q15040 202 aaPredicted RBP-0.15□□□□□ -2.43
HPS3-205ENST00000478525 HIST2H2BEQ16778 126 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 LINC01554Q52M75 96 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 SPATA45Q537H7 98 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.15□□□□□ -2.43
HPS3-205ENST00000478525 LPCAT3Q6P1A2 487 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 XKRXQ6PP77 449 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 MIR17HGQ75NE6 70 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 LRRC25Q8N386 305 aaPredicted RBP-0.15□□□□□ -2.43
HPS3-205ENST00000478525 GDPD1Q8N9F7 314 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 ST6GALNAC3Q8NDV1 305 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 PXT1Q8NFP0 134 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 OR2T4Q8NH00 348 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms