RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 FGF7P21781 194 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 RPP30P78346 268 aaKnown RBP9.56□□□□□ -0.88
PRPF39-203ENST00000477626 FBXL15Q9H469 300 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 METTL1Q9UBP6 276 aaKnown RBP9.56□□□□□ -0.88
PRPF39-203ENST00000477626 ITPR3Q14573 2671 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 ITPR2Q14571 2701 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 K7EIM0 57 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 AGPAT2O15120 278 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 BRI3O95415 125 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 DEFB113Q30KQ7 82 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 NPVFQ9HCQ7 196 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 CMYA5Q8N3K9 4069 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 IGLV11-55A0A075B6I3 123 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 CEACAM3P40198 252 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 C5orf56Q8N8D9 126 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 A0A1W2PRD5 423 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 A0A1W2PRF3 423 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 A0A1W2PRM7 423 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 OPN1MWP04001 364 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 H2AFB1P0C5Y9 115 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 OPN1MW2P0DN77 364 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 OPN1MW3P0DN78 364 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 DEFA4P12838 97 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 ZNF562Q6V9R5 426 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 PERPQ96FX8 193 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 FAM167A-AS1Q96KT0 104 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 HEYLQ9NQ87 328 aaPredicted RBP9.55□□□□□ -0.88
PRPF39-203ENST00000477626 I3L521 148 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 SRP19P09132 144 aaKnown RBP9.55□□□□□ -0.88
PRPF39-203ENST00000477626 IGHV4-31P0DP07 118 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 PLP1P60201 277 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 HAGHQ16775 308 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 PATE2Q6UY27 113 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 SRSF12Q8WXF0 261 aaKnown RBP9.55□□□□□ -0.88
PRPF39-203ENST00000477626 HSPB9Q9BQS6 159 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 HILPDAQ9Y5L2 63 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 TRBV9A0A0B4J1U6 114 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 FCGR2BP31994 310 aaPredicted RBP9.55□□□□□ -0.88
PRPF39-203ENST00000477626 CLEC2AQ6UVW9 174 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 LILRB2Q8N423 598 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 OR2T10Q8NGZ9 312 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 ZC4H2Q9NQZ6 224 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 ZNF580Q9UK33 172 aa9.55□□□□□ -0.88
PRPF39-203ENST00000477626 AKAP6Q13023 2319 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 CD81P60033 236 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 CFHR3Q02985 330 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 GUCA2BQ16661 112 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 GUK1Q16774 197 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 CLEC12BQ2HXU8 276 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 FAM90A2PQ658T7 463 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 CCDC28AQ8IWP9 274 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 LFNGQ8NES3 379 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 FAM213BQ8TBF2 198 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 TMEM37Q8WXS4 190 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 DNASE2O00115 360 aaPredicted RBP9.54□□□□□ -0.88
PRPF39-203ENST00000477626 IFNA5P01569 189 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 OR5G3P0C626 314 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 M6PRP20645 277 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 CD24P25063 80 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 CCDC144NLQ6NUI1 221 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 SLC16A13Q7RTY0 426 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 OR2T6Q8NHC8 308 aa9.54□□□□□ -0.88
PRPF39-203ENST00000477626 STAG3L2P0CL84 134 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 STAG3L3P0CL85 134 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 SSX2Q16385 188 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 ZNF343Q6P1L6 599 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 A6NDX4 124 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 IFNA10P01566 189 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 SFTA3P0C7M3 94 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 GATA3P23771 443 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 STPG3Q8N7X2 389 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 TMEM231Q9H6L2 316 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 UNC79Q9P2D8 2635 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 NPPCP23582 126 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 RPL27AP46776 148 aaKnown RBP9.53□□□□□ -0.88
PRPF39-203ENST00000477626 RAB11AP62491 216 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 MORN5Q5VZ52 161 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 TEPPQ6URK8 271 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 RBM14Q96PK6 669 aaKnown RBP9.53□□□□□ -0.88
PRPF39-203ENST00000477626 COMMD5Q9GZQ3 224 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 LPAR2Q9HBW0 351 aa9.53□□□□□ -0.88
PRPF39-203ENST00000477626 SEPSECSQ9HD40 501 aaKnown RBP9.53□□□□□ -0.88
PRPF39-203ENST00000477626 TRAV20A0A0B4J274 112 aa9.52□□□□□ -0.88
PRPF39-203ENST00000477626 CTXND1A0A1B0GTU2 59 aa9.52□□□□□ -0.88
PRPF39-203ENST00000477626 RBFOX3A6NFN3 312 aa9.52□□□□□ -0.88
PRPF39-203ENST00000477626 HSPB1P04792 205 aaKnown RBP9.52□□□□□ -0.88
PRPF39-203ENST00000477626 AKR1C1Q04828 323 aa9.52□□□□□ -0.88
PRPF39-203ENST00000477626 PXMP4Q9Y6I8 212 aa9.52□□□□□ -0.88
PRPF39-203ENST00000477626 A0A0U1RQK1 487 aa9.52□□□□□ -0.89
PRPF39-203ENST00000477626 FFAR4Q5NUL3 377 aa9.52□□□□□ -0.89
PRPF39-203ENST00000477626 MIC13Q5XKP0 118 aa9.52□□□□□ -0.89
PRPF39-203ENST00000477626 SLC35E1Q96K37 410 aa9.52□□□□□ -0.89
PRPF39-203ENST00000477626 SPATA31B1PQ5VZV4 182 aa9.52□□□□□ -0.89
PRPF39-203ENST00000477626 SLC39A9Q9NUM3 307 aa9.52□□□□□ -0.89
PRPF39-203ENST00000477626 B4DSR2 109 aa9.51□□□□□ -0.89
PRPF39-203ENST00000477626 SCO1O75880 301 aa9.51□□□□□ -0.89
PRPF39-203ENST00000477626 MBP02144 154 aa9.51□□□□□ -0.89
PRPF39-203ENST00000477626 MYCNOSP40205 109 aa9.51□□□□□ -0.89
PRPF39-203ENST00000477626 CX3CL1P78423 397 aa9.51□□□□□ -0.89
PRPF39-203ENST00000477626 RAB24Q969Q5 203 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms