RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 A6NHS1 94 aa16.95■□□□□ 0.3
SF1-214ENST00000477596 LGALS9O00182 355 aa16.95■□□□□ 0.3
SF1-214ENST00000477596 MT-CO2P00403 227 aa16.95■□□□□ 0.3
SF1-214ENST00000477596 RNASE2P10153 161 aaKnown RBP16.95■□□□□ 0.3
SF1-214ENST00000477596 BTCP35070 178 aa16.95■□□□□ 0.3
SF1-214ENST00000477596 CNPY1Q3B7I2 92 aa16.95■□□□□ 0.3
SF1-214ENST00000477596 ANKRD55Q3KP44 614 aa16.95■□□□□ 0.3
SF1-214ENST00000477596 NMSQ5H8A3 153 aa16.95■□□□□ 0.3
SF1-214ENST00000477596 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.95■□□□□ 0.3
SF1-214ENST00000477596 SIGLEC8Q9NYZ4 499 aa16.95■□□□□ 0.3
SF1-214ENST00000477596 A0A0B4J2A0 478 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 INS-IGF2F8WCM5 200 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 ANXA3P12429 323 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 FOLR2P14207 255 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 VAMP1P23763 118 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 SPCS3P61009 180 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 PPP1R1AQ13522 171 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 RBMS2Q15434 407 aaKnown RBP16.94■□□□□ 0.3
SF1-214ENST00000477596 Q56UQ5 140 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 TMEM128Q5BJH2 165 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 LGI3Q8N145 548 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 SHPKQ9UHJ6 478 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 FLVCR2Q9UPI3 526 aa16.94■□□□□ 0.3
SF1-214ENST00000477596 ADMP35318 185 aa16.93■□□□□ 0.3
SF1-214ENST00000477596 SNCAP37840 140 aa16.93■□□□□ 0.3
SF1-214ENST00000477596 FAM106AQ4KMX7 169 aa16.93■□□□□ 0.3
SF1-214ENST00000477596 CENPSQ8N2Z9 138 aa16.93■□□□□ 0.3
SF1-214ENST00000477596 BSCL2Q96G97 398 aaPredicted RBP16.93■□□□□ 0.3
SF1-214ENST00000477596 ZNF414Q96IQ9 312 aa16.93■□□□□ 0.3
SF1-214ENST00000477596 ENY2Q9NPA8 101 aa16.93■□□□□ 0.3
SF1-214ENST00000477596 COL7A1Q02388 2944 aa16.93■□□□□ 0.3
SF1-214ENST00000477596 NAP1L6A6NFF2 107 aa16.92■□□□□ 0.3
SF1-214ENST00000477596 A8MWP6 167 aa16.92■□□□□ 0.3
SF1-214ENST00000477596 NDUFB6O95139 128 aa16.92■□□□□ 0.3
SF1-214ENST00000477596 SULT1A3P0DMM9 295 aa16.92■□□□□ 0.3
SF1-214ENST00000477596 SULT1A4P0DMN0 295 aa16.92■□□□□ 0.3
SF1-214ENST00000477596 CD300EQ496F6 205 aaPredicted RBP16.92■□□□□ 0.3
SF1-214ENST00000477596 TM4SF20Q53R12 229 aa16.92■□□□□ 0.3
SF1-214ENST00000477596 OR52E5Q8NH55 327 aa16.92■□□□□ 0.3
SF1-214ENST00000477596 DYNLRB2Q8TF09 96 aa16.92■□□□□ 0.3
SF1-214ENST00000477596 B9D2Q9BPU9 175 aa16.92■□□□□ 0.3
SF1-214ENST00000477596 ZNF436Q9C0F3 470 aaPredicted RBP16.92■□□□□ 0.3
SF1-214ENST00000477596 IGHV3OR16-8A0A075B7F1 116 aa16.91■□□□□ 0.3
SF1-214ENST00000477596 SFT2D2O95562 160 aa16.91■□□□□ 0.3
SF1-214ENST00000477596 SRPXP78539 464 aa16.91■□□□□ 0.3
SF1-214ENST00000477596 PVRIGQ6DKI7 326 aa16.91■□□□□ 0.3
SF1-214ENST00000477596 TMEM190Q8WZ59 177 aa16.91■□□□□ 0.3
SF1-214ENST00000477596 CEBPZOSA8MTT3 80 aa16.9■□□□□ 0.3
SF1-214ENST00000477596 PLA2G10O15496 165 aa16.9■□□□□ 0.3
SF1-214ENST00000477596 CTSGP08311 255 aa16.9■□□□□ 0.3
SF1-214ENST00000477596 CBLN1P23435 193 aa16.9■□□□□ 0.3
SF1-214ENST00000477596 CD69Q07108 199 aa16.9■□□□□ 0.3
SF1-214ENST00000477596 DCTN2Q13561 401 aaKnown RBP16.9■□□□□ 0.3
SF1-214ENST00000477596 BSXQ3C1V8 233 aa16.9■□□□□ 0.3
SF1-214ENST00000477596 MFAP4P55083 255 aa16.89■□□□□ 0.29
SF1-214ENST00000477596 SMCO1Q147U7 214 aa16.89■□□□□ 0.29
SF1-214ENST00000477596 DEFB114Q30KQ6 69 aa16.89■□□□□ 0.29
SF1-214ENST00000477596 LCN12Q6JVE5 192 aa16.89■□□□□ 0.29
SF1-214ENST00000477596 SPSB3Q6PJ21 355 aa16.89■□□□□ 0.29
SF1-214ENST00000477596 ATP6V0BQ99437 205 aa16.89■□□□□ 0.29
SF1-214ENST00000477596 FNDC4Q9H6D8 234 aaPredicted RBP16.89■□□□□ 0.29
SF1-214ENST00000477596 HEYLQ9NQ87 328 aaPredicted RBP16.89■□□□□ 0.29
SF1-214ENST00000477596 MRPL36Q9P0J6 103 aaKnown RBP16.89■□□□□ 0.29
SF1-214ENST00000477596 MLXQ9UH92 298 aa16.89■□□□□ 0.29
SF1-214ENST00000477596 SMAD5-AS1Q9Y6J3 95 aa16.89■□□□□ 0.29
SF1-214ENST00000477596 MLANAQ16655 118 aa16.88■□□□□ 0.29
SF1-214ENST00000477596 Q8N1Y9 231 aa16.88■□□□□ 0.29
SF1-214ENST00000477596 UXS1Q8NBZ7 420 aa16.88■□□□□ 0.29
SF1-214ENST00000477596 TMEM170AQ8WVE7 144 aa16.88■□□□□ 0.29
SF1-214ENST00000477596 C7orf50Q9BRJ6 194 aaKnown RBP16.88■□□□□ 0.29
SF1-214ENST00000477596 CENPXA8MT69 81 aa16.87■□□□□ 0.29
SF1-214ENST00000477596 ZNF207O43670 478 aaKnown RBP16.87■□□□□ 0.29
SF1-214ENST00000477596 ANXA7P20073 488 aaKnown RBP16.87■□□□□ 0.29
SF1-214ENST00000477596 FCGR2BP31994 310 aaPredicted RBP16.87■□□□□ 0.29
SF1-214ENST00000477596 SUB1P53999 127 aaKnown RBP eCLIP16.87■□□□□ 0.29
SF1-214ENST00000477596 TNFRSF9Q07011 255 aa16.87■□□□□ 0.29
SF1-214ENST00000477596 BTNL8Q6UX41 500 aa16.87■□□□□ 0.29
SF1-214ENST00000477596 LRTM2Q8N967 370 aa16.87■□□□□ 0.29
SF1-214ENST00000477596 WDR89Q96FK6 387 aaPredicted RBP16.87■□□□□ 0.29
SF1-214ENST00000477596 ASCL2Q99929 193 aa16.87■□□□□ 0.29
SF1-214ENST00000477596 C20orf24Q9BUV8 137 aa16.87■□□□□ 0.29
SF1-214ENST00000477596 HSPB7Q9UBY9 170 aa16.87■□□□□ 0.29
SF1-214ENST00000477596 NDUFA4O00483 81 aa16.86■□□□□ 0.29
SF1-214ENST00000477596 SLC24A4Q8NFF2 622 aa16.86■□□□□ 0.29
SF1-214ENST00000477596 OR2K2Q8NGT1 345 aa16.86■□□□□ 0.29
SF1-214ENST00000477596 OR1S1Q8NH92 325 aa16.86■□□□□ 0.29
SF1-214ENST00000477596 RBKSQ9H477 322 aa16.86■□□□□ 0.29
SF1-214ENST00000477596 PALMDQ9NP74 551 aa16.86■□□□□ 0.29
SF1-214ENST00000477596 UFC1Q9Y3C8 167 aa16.86■□□□□ 0.29
SF1-214ENST00000477596 A0A1B0GU03 582 aa16.85■□□□□ 0.29
SF1-214ENST00000477596 DUXBA0A1W2PPF3 345 aa16.85■□□□□ 0.29
SF1-214ENST00000477596 C9orf170A2RU37 121 aa16.85■□□□□ 0.29
SF1-214ENST00000477596 ZNF785A8K8V0 405 aa16.85■□□□□ 0.29
SF1-214ENST00000477596 NUPL2O15504 423 aaKnown RBP16.85■□□□□ 0.29
SF1-214ENST00000477596 LYRM1O43325 122 aa16.85■□□□□ 0.29
SF1-214ENST00000477596 GNG7O60262 68 aa16.85■□□□□ 0.29
SF1-214ENST00000477596 HOXB5P09067 269 aa16.85■□□□□ 0.29
SF1-214ENST00000477596 OPRK1P41145 380 aa16.85■□□□□ 0.29
SF1-214ENST00000477596 HTR2BP41595 481 aa16.85■□□□□ 0.29
SF1-214ENST00000477596 TMEM61Q8N0U2 210 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms