RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 TSPAN19P0C672 248 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 CD79AP11912 226 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 CDK2P24941 298 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 PSMB9P28065 219 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 MIPP30301 263 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 SRIP30626 198 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 ZNF140P52738 457 aaPredicted RBP1.1□□□□□ -2.23
VPS50-213ENST00000477572 EMP1P54849 157 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 PIGPP57054 158 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 TAS2R30P59541 319 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 DEFA3P59666 94 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 NCALDP61601 193 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 HSPE1P61604 102 aaKnown RBP1.1□□□□□ -2.23
VPS50-213ENST00000477572 HIST1H3AP68431 136 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 SLC35A2P78381 396 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 H3F3AP84243 136 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 HIST1H1AQ02539 215 aaPredicted RBP1.1□□□□□ -2.23
VPS50-213ENST00000477572 PRDX1Q06830 199 aaKnown RBP1.1□□□□□ -2.23
VPS50-213ENST00000477572 PRDX4Q13162 271 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 AGTRAPQ6RW13 159 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 Q6ZRU5 148 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 GOLT1AQ6ZVE7 132 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 FAM183BPQ6ZVS7 135 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 HIST2H3AQ71DI3 136 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 DEFB128Q7Z7B8 93 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 BAP18Q8IXM2 172 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 C1orf158Q8N1D5 194 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 EXOC3-AS1Q8N2X6 119 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 SLC30A7Q8NEW0 376 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 OR4C6Q8NH72 309 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 OR10D3Q8NH80 312 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 MCFD2Q8NI22 146 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 CANT1Q8WVQ1 401 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 KLK6Q92876 244 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 CMBLQ96DG6 245 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 DCUN1D1Q96GG9 259 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 SLC35G5Q96KT7 338 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 OR7D2Q96RA2 312 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 OR52E6Q96RD3 313 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 GPER1Q99527 375 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 B9D2Q9BPU9 175 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 TXNDC17Q9BRA2 123 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 FAAP24Q9BTP7 215 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 DOHHQ9BU89 302 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 PDCD10Q9BUL8 212 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 SNHG12Q9BXW3 62 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 SMIM3Q9BZL3 60 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 LINC00470Q9BZP3 86 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 C20orf27Q9GZN8 174 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 TMEM222Q9H0R3 208 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 OR51E2Q9H255 320 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 CST9LQ9H4G1 147 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 CACYBPQ9HB71 228 aaKnown RBP1.1□□□□□ -2.23
VPS50-213ENST00000477572 POPDC3Q9HBV1 291 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 SPANXA1Q9NS26 97 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 UQCC1Q9NVA1 299 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 COMMD9Q9P000 198 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 MRPL27Q9P0M9 148 aaKnown RBP1.1□□□□□ -2.23
VPS50-213ENST00000477572 GLS2Q9UI32 602 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 RPUSD1Q9UJJ7 312 aaKnown RBP1.1□□□□□ -2.23
VPS50-213ENST00000477572 DNAJC12Q9UKB3 198 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 ERG28Q9UKR5 140 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 BAIAP2Q9UQB8 552 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 ZFP30Q9Y2G7 519 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 POLR1DQ9Y2S0 133 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 LINC00588Q9Y4M8 146 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 MYH6P13533 1939 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 MYH13Q9UKX3 1938 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 MED14O60244 1454 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 IFT140Q96RY7 1462 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 ARHGAP35Q9NRY4 1499 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 CUL7Q14999 1698 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 MAP3K1Q13233 1512 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 ARAP3Q8WWN8 1544 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 NUP210LQ5VU65 1888 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 KIF15Q9NS87 1388 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 DSCAML1Q8TD84 2053 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 PTPRKQ15262 1439 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 DOCK4Q8N1I0 1966 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 A0A087WUU8 490 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 A0A0J9YY10 115 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 A0A1B0GX51 115 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 A0A1B0GX78 115 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 hADV38S2A0JD32 116 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 TRAPPC13A5PLN9 417 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 LINC00862A6NCI5 91 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 C17orf98A8MV24 154 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 E7EQ34 232 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 INMT-MINDY4F8WBC2 141 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 H3BQF6 201 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 J3KT08 172 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 CORTO00230 105 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 ZNF682O95780 498 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 EPPINO95925 133 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 CA2P00918 260 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 ATP5G1P05496 136 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 OR5G3P0C626 314 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 CPMP14384 443 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 CCL1P22362 96 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 BLVRBP30043 206 aaPredicted RBP1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms